| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84973 |
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| Symbol | SLN1 |
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| ID | 4840041 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 977559 |
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| End bp | 981853 |
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| Gene Length | 4295 bp |
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| Protein Length | 1168 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391356 |
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| Product | histidine kinase osmosensor Osmolarity two-component system protein SLN1 |
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| Protein accession | XP_001385881 |
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| Protein GI | 150866326 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.656577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | AAATAGTGCA GTTTATCTGG CCGTGTTTGC TTCGTTATAT CTTTGCTAGT ACTGCTTGAA
ACTATTACAA TCAGTTCCAC CTCTTCTGTT TGTTTGCGCC TTGTTGCCTT TGTTTGCCAG
AACCAACAAT ACCATACAAG ATACAACACT CAGATCAGAC CCACTACACT TGCTTTGAAA
AGAGTCAAAC ATATCTACTT ATAAGGACAA CTGATCGTGA TCATTTGAAT ACTTCGGCTG
GTTATCTCCT TTTCGATATC TATTTCGAGC CAGACACTAA TCTCACATTC ATCGAATCAA
ATATATATGA CAGACCAACA CTGGGTATAG CCTTCGTTAC ACATTCGAAA TGAGACGATT
AAAGATCGGT ATCAGACCCC AGTTGATCAT ACTTGTGGGG TTTGCGTCCC TTTTCTCGCT
CTTGATCTTG GCTATCGTCA CAGCAGTGTA TTTCTCCTCT AATTTGAGTG ATTTGAGAGC
AGAACGTTTG GAAGTCATCT CCCAACTTAA AACAACTCAG GTCAGGCAGG CCGTAGAATA
TATATACTAC CAGGTGTATT GGTTGACTAC TAAGGATTCC ATATACGCTC CATTATCTTC
CTATAGAGCT GGTAATATCA CCACATCCAT ATTCAGCGAA GCTCAAAACA CACTTGACCA
GTTCTTAATA TCTTCAGAGC TCTTTGCTGC CGCCAGATTA TATAACTTAA ATTTGGAAAT
CGTTGCCGAA AGCTATAATA ATGCCACATC GATTTCACAA CCGGCCATGG ATTTCTTGTA
TCCGTTGGCG CAAAACGCCA CGATACCCCA ATCATTGCTA CAACAATCAA GCAATAATGT
CGAACCTTAC TTCACAGGTC CAATAGGGAA CAGCACAGAC CCAAACTCTG CATTTTACAT
GGGTATCACT TTGCCTATAT ATTCAAACTC GTCCATCATT TTGGACGACC CTTCATTATC
AGGTTACTTA ACCGTCATTG CATCAGCCCA GAGCATCCAA GCAGCTATTA ATGACACTAC
TGGGTTTTCG AACAATTCAT CCGCTGATTA CATTGTCATT GCTCTTCGTC CAATCTATGG
CGACGTTGAA GACGGTGCGA CCACCTTCAA TTCCGACGAA ACAGGTCAAG TAATCGGTTT
CCAAACCGTT TTCCCAGTTA AGGACAATAT TTTATCACCT AACAATGTTT ACAATATTAA
CGATTCTTCG CTGGTGAAGG AGGCATTTTC AAGGACATAT GGATCTGCTA CCAACGTCAG
GTCAATTACG GGCAAATATG TTGCAATAGG CTTCAACCAG ATTCTATTAG ATTCCACCAC
AAGATGGGCG GTGATTATTG AGCAAGCAAG ATCTAAATTT TTGCAGCCTG TCAACAATTT
AAGAAAAATA ATCATTGGTG TTGTTATTGG AATTGGTGTG TTCATGTGTC TTATTACATT
CCCATTGGCA GTTTTCTTTA TACGACCAAT TACAAAGCTT AAGGAAGCAA CGGAAGCGAT
CACGAAGTCA AAGAAACAGT TTAAGCAGCA AAAAGATAGG GATAGTTCGG CTGCGAGTCC
AATACCTTCA TCCAACCCTC CTCCTCCGTA TACCACATTG AATCACAGGC ATAAGAGAAA
CAGCGTGAAG TCTACGTCTA ACACCAGTAC CTCTGGTTCC TTGTATTCGA CGGCAATTAG
ACTTCCAGGT AGAATTCCAA ACTCAAAGAA GTTCTTCAAA GATGAATTCA CTGAGCTTTC
TGAGGCTTTC AATATCATGA CAGAAGAACT CGACAAGCAG TACACGCATT TGGAAGATAG
AGTGAAATTG AGAACCAAGG AATTAGAAGC GTCCAAAATC GAAGCAGAAT CTGCGAATGA
AGCGAAGACT GTATTCATTG CTAATATTTC TCACGAATTG AGAACTCCAT TAAACGGTAT
TTTAGGAATG ACTTCGATTG CCATGGATGA AGAGGACCAA ACAAGAATTC AAGATTCCTT
GAAGTTAATA CACAGATCAG GAGAACTTTT ATTGCATATA TTAACCGAGT TGTTGACCTA
TTCCAAAAAT ACTTTGAATA GATCTAAATT GGAAAAGTCT AATTTTCAAA TTTTAGAGGT
TGTTTACCAA GTGAAATCCA TTTTCAGCAA GCTTGCCATG GACCAAAGAG TAAATTTCAA
GATCTGGGTT CGCCCCAACA TTTTCAGAAA GTTGATCCTA TATGGAGATT CCAATAGAAT
TATCCAAGTT GTAATGAATC TTGTTTCCAA CTCACTTAAA TTCACACCAA TTGATGGGTC
TGTTGAAGTT ACATTCAAAC TATTGGGTGA GTATGATAAA GAAAGATCTC AACAAGATGG
ATACAAACAG GTTCATGTTT TAAAAGGCAC AAAGACTAGT CCAAATTCTT CAACTTCTAA
CGAAGCAACA GGGATGGCAA AGTCTACCTC ATCTTCTACG CTAGCAATAA TGTCATCGTA
CTACAAAACA AAGCCGATTC CAAAGATCGG AAAGCCAACA CCCGCACTCC CTGAAGAAAG
ACTGAACGAT ATTGAATTGA GTCCGGTAAA ATCCAATTCA TCTGATTCCA CTGATCTCTC
AAAGAATCTT GACTCCGATA GAGTTAGTTT ACTGACAATC TCTACAACAG AGTATGAGAA
TAAGATTTTC GAATCTCAGT TTAACCACAT GAAAGCTTTA CCTAAGCTTC CTGTTAGTTC
AAGTTCAAAT TCAATTACAG AATTCGAAGA TGACCAACCG AGACCGAATG CTCAACATCT
AAAAGAAGAA CAGATTGGAT CAAATAAGAT GAAGCGTCCA GATTTAACAC CACAAAGCAG
TGGCAGGCCA AAGCGAATTG AAAACAAGAG AGGAAATTCT TTTATTGCTA CTCCTATGGC
CACGGCAGAA TTGATAAAAA ACAATAAAGC ATTTAGAATC AGAAATATGT ACAAACCAAA
AACTTGGGTT GTCCAGATAG AGGTCAGAGA CACGGGTCCG GGTATTGAGC CAGCTTTGCA
GGAGAAGGTT TTTGAACCAT TTGTTCAAGG TGACCAAACA TTGTCCAGAA GTTATGGTGG
TACGGGGTTG GGATTATCCA TTTGTAGACA ATTGGCTACC ATGATGAAAG GAACCTTAAC
TTTGAAGTCG GCAATTGGCG TTGGATCAAT ATTCACATTC ACAGTCCCAT TACCTCAAAC
TGGTGAGATA CTAGTAGACG AAAGCGAAAT GGGCGAATTT TGTGAAGACG AATTCAATCC
AAAAGCTAGA GTTAATAGAA AGGTTGCGTT TAAGAACTCA ACAATGGATG TTGATAATCC
GACTCATCAT GAGTACGAAA ATGACGAACT TAGTGAGAAA GACGACTTCG TGGAAATGTC
TCCATTGCGT CCACAGCCAC CTCCTTCAAG GGTAAGGACA GATTCGGTCC CCAGATCTGA
TTCCTCTGGG GACAGTCCTC GACAAGAGAA TTCAGACTCT CCTGGAAGTT CTGGTAGCTT
TCAATTACTA GGAAAAGTGG ACCCACCTCG GACCACATAT GAAAAACCAC ATCTTATAAC
CAGGTCATCT ACAGGAACTG CAAATTCAGC GAACGCCAGT GACCGCCTGG ATCTACATCA
CAACATACTT GATGATTTGT CAGATCTCAA AATCTTGGTT GCGGAAGATA ATCTGGTAAA
CCAAGAAGTA ATCAAGAGAA TGCTCAAATT GGAAGGCTTC ACCAATATCA CATTGGCTTG
TAATGGTGCT GAGGCAGTAG AGTTAACCAA AGAGTCGATT GAAAAGGATG AAATTTTTGA
TTTGATATTT ATGGATGTGC AGATGCCCAA AATCGATGGT CTTTTGGCTA CGCGAATGAT
AAGGACAAAT TTACGATTCG AGAACCCCAT CATTGCATTA ACTGCATTTG CAGATGAAAG
TAACGTCAAG GAGTGTCTTA ATAGTGGAAT GAGTGGCTTC CTATCCAAAC CTATCAGAAG
AACCAACTTA AGGAAGATTA TTGTTGAGTT CAGTCCTGTG TTATTAAGTG AGATAGTTAC
AACACCACAA ACACATCAAA GCGACGAAAA GCGTCTTGGA TACCCACCAA CCAATCTTGG
CAGCAGCGCT TAGAGAAAAA CACCGAAGAA AAGAGAACAA AATGAGCTCA CAAATGTAAC
ATTTCAACTA TTGGCGAAGA GCTCCACCAA TAACATCGCC TCATTAGCAT TATAATTTTC
ATTTCTTTCG TTGCCAATTT ACAATGTATA ATCATTTATA ATTTAGTAAT TCTACTTCAA
ATTGAAGAAT GTGTAATAAA CATAGGAATA AGAAG
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| Protein sequence | MRRLKIGIRP QLIILVGFAS LFSLLILAIV TAVYFSSNLS DLRAERLEVI SQLKTTQVRQ
AVEYIYYQVY WLTTKDSIYA PLSSYRAGNI TTSIFSEAQN TLDQFLISSE LFAAARLYNL
NLEIVAESYN NATSISQPAM DFLYPLAQNA TIPQSLLQQS SNNVEPYFTG PIGNSTDPNS
AFYMGITLPI YSNSSIILDD PSLSGYLTVI ASAQSIQAAI NDTTGFSNNS SADYIVIALH
GATTFNSDET GQVIGFQTVF PVKDNILSPN NVYNINDSSS VKEAFSRTYG SATNVRSITG
KYVAIGFNQI LLDSTTRWAV IIEQARSKFL QPVNNLRKII IGVVIGIGVF MCLITFPLAV
FFIRPITKLK EATEAITKSK KQFKQQKDRD SSAASPIPSS NPPPPYTTLN HRHKRNSVKS
TSNTSTSGSL YSTAIRLPGR IPNSKKFFKD EFTELSEAFN IMTEELDKQY THLEDRVKLR
TKELEASKIE AESANEAKTV FIANISHELR TPLNGILGMT SIAMDEEDQT RIQDSLKLIH
RSGELLLHIL TELLTYSKNT LNRSKLEKSN FQILEVVYQV KSIFSKLAMD QRVNFKIWVR
PNIFRKLILY GDSNRIIQVV MNLVSNSLKF TPIDGSVEVT FKLLGEYDKE RSQQDGYKQV
HVLKGTKTSP NSSTSNEATG MAKSTSSSTL AIMSSYYKTK PIPKIGKPTP ALPEERSNDI
ELSPVKSNSS DSTDLSKNLD SDRVSLSTIS TTEYENKIFE SQFNHMKALP KLPVTFRIRN
MYKPKTWVVQ IEVRDTGPGI EPALQEKVFE PFVQGDQTLS RSYGGTGLGL SICRQLATMM
KGTLTLKSAI GVGSIFTFTV PLPQTGEILV DESEMGEFCE DEFNPKARVN RKVAFKNSTM
DVDNPTHHEY ENDELSEKDD FVEMSPLRPQ PPPSRVRTDS VPRSDSSGDS PRQENSDSPG
SSGSFQLLGK VDPPRTTYEK PHLITRSSTG TANSANASDR SDLHHNILDD LSDLKILVAE
DNSVNQEVIK RMLKLEGFTN ITLACNGAEA VELTKESIEK DEIFDLIFMD VQMPKIDGLL
ATRMIRTNLR FENPIIALTA FADESNVKEC LNSGMSGFLS KPIRRTNLRK IIVEFSPVLL
SEIVTTPQTH QSDEKRLGYP PTNLGSSA
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