| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84817 |
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| Symbol | |
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| ID | 4839921 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1019557 |
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| End bp | 1021736 |
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| Gene Length | 2180 bp |
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| Protein Length | 568 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391236 |
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| Product | predicted protein |
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| Protein accession | XP_001385552 |
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| Protein GI | 150866076 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5243] HRD ubiquitin ligase complex, ER membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CACAGAGTAG AATCGGAAAC CTCACTTCAT TCGCCCATAT TTCAGACACT CATCAAGAAT
TACGAATTAC TAATTACGAT AGCCTCACTA GACAACGAAA CCCAGATACA TAAGCAATGA
TACCTAAGGG AATGCAGTAC CTACTAGGGT ACACCATTAT TTCCATGGCT CTGTTGGCGT
GGGCATCATA CGACTCGTTG ACTAAAGCGG TGAACTTTGA AGTGTTTTTG ATGGAGATGA
CCGACGGAGT CAAACTTGGA ATACTCATTA ACAGCGTGGC TTTGAATTTC GTGATGGTAG
GGAAGATTTT GCAATTGTCA CTCTTTGGCG AATTAAGATT GCTAGAAGCA GATCATTTGA
TGGAGAAATT GCCGTTCTAC GCGGGTAATT TGCTTTTCAA TTTGGCGACA ACAGACAATT
TTTTGCTCAA TTCATTTCTA CTTGTAACGG CCGTTGGCTT TAAAGCCTTC CACATAATCT
TGATAGACAG AGCTGACTAC GTCAACTTGA GAATCGCTAA TAATTCCAAC AATGAAACTT
ACACGAGAGC CATAATAATC AAGAAGTATG TGTTCAATCT CTATTTCTGG CTTGTCTTCT
TTTTCATATT CCTTGATTTC TCAATTGCTA AATTGCTTGT CTACGACGTC TTCCAGGGTA
TAAATTCCGT GGTCTGTCTC TTGTTTGGCT TCGAGTTTGC CATACAGGGA GTTGAAGCCC
TCACTTACTG TGCAAAGATG TTTATCAACA TCTACGAATT GGCAGTCTAT AGAATAAATG
AGCACCACGA CAATAGTGAA GATGACGACG ACTTTCTTGA CGAAGATATC GACATAATAT
GGGAAACAAA AGCTTTTTAC AGCAAAGGTA TAGACATAGC ATCATCGTCT TTGATGGCAG
TATCATATCT AGCTTTCATC TATTTGTTAA CTTTCCATTC CGTGTTGTCC CTTCCTATAT
CTATGCTCCA AGGAACCTAT TCCAGTTTGA AGCAAACCTA CACAGAAGTC AGGCAATTAT
TTGCATTTAT CGAATCTTCT AAGCGTTTGG ACAACCAACT TCGAACTGCC ACAAAAGAAG
ATTTAGAGGC AACTGACAAC TTGTGTATTA TTTGTCGTGA AGATATGAAC TCGGTTGAAG
ACTACGAAAC GAATTTCAAA AAGAGCCTAC CAGCCAGAAG AAGGCCCAAG GCACTACCAT
GTGGTCATAT ATTGCATATG GGTTGTTTAA AAGAATGGCT TGAAAGATCA GATAGCTGTC
CACTCTGTAG AAAGAAAGTG TTCGATCCTC CTGATCAGGT GAACGCGCAA ACAGTTGATC
CTCAACAGGG CCAGGGTCAA CCAGCCCAGC CGGCTGTCAA CCCAGCAGAA GCATTGCAGA
TAAGGTTGCA AGAATTCACA GATCTCCTTA ATGTACACAG AAACAATCCA CAAGATAATA
TCCAAAGAGA CCAGAATATC CAAAGAGAAG AGGCAAATCA TCCTCAAGAA CAAAACCAAG
AAGAAGCTCA ACAACATCAA TTAGAAGAAA ACGAAAATCA AGCACAGAGA GAAATTCCTG
CAAATCCTGA GGATGTACTA CAAAGAAGGC TTCAAGGATT CGCTGATATC CTCAATATGA
ATAGAAACAT TTCACAAGAT AACATGCAAA GAGATCAAAC AGCACATGAA CAGAACCAGG
AAGAAATTGA GGATCAGCAA CAATCCGAAG GAAGTGAATC CCAAACAAAG AGTGATGTCA
AAGAGAGCTC TTCACTTCAA ATAGATAATA GTTCAGGAGC TGACGTAGTT GAAGGCTCTA
GTAACAACAT ACCAGATTCT AGTGTCGCAA CTCCGTCTAA CCCTTCAGGT GAAAGACAAA
CCATCAAGCT TCCACCAAAT TCTCTATTAC CTCCTGGTTG GGCTGTATTG CCATTAAAGA
GAACCACATT TATCGAGTCA GGGGGGAGAG TCGATTACTA TGTCAGTTTC TCAAGATTTC
AAAAGGGTGC TTTGAAAATA CGGCAAGTTG AGCCAATTAA CAATAGAATA ATCTATCCCT
TCACTCAGGT CAAACAAGAT GGAGAACCCG AGGAGTAAAC TAATGTGAAT AAATCGGGGG
TTATGTATAT TAGTTGGCAC AAAACGATAC CAAATTGTTT CGTTCAGTCA TACGTAGATA
TAATACAATA ATAATTGGGC
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| Protein sequence | MIPKGMQYLL GYTIISMASL AWASYDSLTK AVNFEVFLME MTDGVKLGIL INSVALNFVM
VGKILQLSLF GELRLLEADH LMEKLPFYAG NLLFNLATTD NFLLNSFLLV TAVGFKAFHI
ILIDRADYVN LRIANNSNNE TYTRAIIIKK YVFNLYFWLV FFFIFLDFSI AKLLVYDVFQ
GINSVVCLLF GFEFAIQGVE ALTYCAKMFI NIYELAVYRI NEHHDNSEDD DDFLDEDIDI
IWETKAFYSK GIDIASSSLM AVSYLAFIYL LTFHSVLSLP ISMLQGTYSS LKQTYTEVRQ
LFAFIESSKR LDNQLRTATK EDLEATDNLC IICREDMNSV EDYETNFKKS LPARRRPKAL
PCGHILHMGC LKEWLERSDS CPLCRKKVFD PPDQNIQREE ANHPQEQNQE EAQQHQLEEN
ENQAQREIPA NPEDNQEEIE DQQQSEGSES QTKSDVKESS SLQIDNSSGA DVVEGSSNNI
PDSSVATPSN PSGERQTIKL PPNSLLPPGW AVLPLKRTTF IESGGRVDYY VSFSRFQKGA
LKIRQVEPIN NRIIYPFTQV KQDGEPEE
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