| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84563 |
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| Symbol | SYN4 |
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| ID | 4839813 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1351045 |
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| End bp | 1352646 |
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| Gene Length | 1602 bp |
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| Protein Length | 511 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391128 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | XP_001385955 |
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| Protein GI | 150866377 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.600288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAAC TTTTCAAAAC TTCCAGACAG TACAGGCGTT TGCCAATTTT TCGTTCGATT
TTTCACTCTC AAAAGTACTT TTCTTCACTT ACTCCTACCA TCAAGGACTT ACTAGCTAAT
CCACCACTGC CAGACTCAAC GATATTAGCT CAGGGTCATA TCAAGTCAAT TAGACAGGGC
AAGAGTGCCG GGTTCATCGA CTTGTCGGAC GGCTCAGCCC ATTTGAGCTT GAACGTGATA
GTGAAAAATC CATTAGAAGT GCTATCTAAA TTACAATTGA AAGTCGGACA GAGCATTCAG
GTTCAAGGAA AATGGGTAGA GTCTCAGGGA ACTCAAGATT ATGAGATTGT CTACAATTTT
GAAGATGTGG CACATAGCCT TCGTGTAGTT GGAGATGTTT CGGAGCAGTA TCCTATCCAG
AAGAAGTCGC TGTCGTACCA GTTCTTGCGA AACCATCCGA CATTGAGACA CAGAACTTCA
ACGTTGGCTT CCTTGCTTCG TTTCAGATCA TTTGTAGAAT CACTGTTGTT TGAATTTTTC
AACGGCAACA GCTTCACCAA GGTAGTGCCA CCACTCATCA CCAGCTCAGA CTGTGAGGGT
GCTGGTGAGC AGTTTTCTGT AGAGTCTTTG TCTAAGCTCA ATGAAAGTAG AAACAAGACG
ACTTTGCTGT CTGAAGATCA CTTCTTTGGA AAATCCACCT ATTTGACGGT ATCAACACAG
CTCCACTTGG AAGTGTTGGC GTTGTCGTTG AATCGAGTAT GGACTTTGAC TCCTTGTTTC
AGAGCCGAAG ACTCCAATAC CAATCGCCAT TTGAGCGAGT TCTGGATGTT GGAAGCCGAA
ATATGCTACT TGGGCGACTT GAACCAGTTG ACTTCTTTCA CTGAAGATAT GATTAGACAC
GTTGCCAACT CTTTGAAGCA GTCTTGCAAT GACAGCAGTA TTTCTGGCGG AGCTGTAGAT
CTTCTTGGTT CACGATTCAA CAAGGAAGAT GTAGAGTTGA TGAAGAATAG ATGGGATACT
GTCTTGAGTG AAGCACTGTG GCCATCCATC ACTTATACCG AGGCAGTTGA GATTATTAAC
AGAGTCATGA ACAAAGGAAG ACTGAAAAAT CGCTTGCAGT GGGGGGATTC TATCCAGACT
CCTCATGAGA AGTGGCTTGC TGGAGAATAT TTCAAATCGC CAGTATTTAT CACCGATTAC
CCTACTGCCG AGAAGCCCTT CTATATGCCC AAGTCCAAGA ACTTCGATCC GCAGAGGCCA
ACAGTGGCAT GCTACGACTT GATATTGCCT GAAATAGGCG AGCTCGTAGG AGGATCCATG
AGAGAGCATA ACTACAATAA TCTTGTGGAA GAAATGAAAA ACAGAAATAT GAACCTTGAC
GAAATGCAAT GGTATTTATC TACCCGTGAA AACGGTACAG TACCTCATGG AGGATTTGGC
ATGGGATTTG AGCGGTTGAT AGCATACTTA TCGGGAATGG AAAACGTCAA GGAAGTGATA
CCATTCCCCA GAGTTCCTCA ATCCTGTCAT TGTTAGTTGT ATATAGATGA TTTATGTGGT
GTCTTGTGAA TAGAACATAA TAGATTCATG ACAATTTTTT GG
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| Protein sequence | MNQLFKTSRQ YRRLPIFRSI FHSQKYFSSL TPTIKDLLAN PPSPDSTILA QGHIKSIRQG
KSAGFIDLSD GSAHLSLNVI VKNPLEVLSK LQLKVGQSIQ VQGKWVESQG TQDYEIVYNF
EDVAHSLRVV GDVSEQYPIQ KKSSSYQFLR NHPTLRHRTS TLASLLRFRS FVESSLFEFF
NGNSFTKVVP PLITSSDCEG AGEQFSVESL SKLNESRNKT TLSSEDHFFG KSTYLTVSTQ
LHLEVLALSL NRVWTLTPCF RAEDSNTNRH LSEFWMLEAE ICYLGDLNQL TSFTEDMIRH
VANSLKQSCN DSSISGGAVD LLGSRFNKED VELMKNRWDT VLSEASWPSI TYTEAVEIIN
RVMNKGRSKN RLQWGDSIQT PHEKWLAGEY FKSPVFITDY PTAEKPFYMP KSKNFDPQRP
TVACYDLILP EIGELVGGSM REHNYNNLVE EMKNRNMNLD EMQWYLSTRE NGTVPHGGFG
MGFERLIAYL SGMENVKEVI PFPRVPQSCH C
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