Gene PICST_73490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_73490 
Symbol 
ID4840027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp644962 
End bp645551 
Gene Length590 bp 
Protein Length131 aa 
Translation table12 
GC content40% 
IMG OID640391342 
Productpredicted protein 
Protein accessionXP_001385472 
Protein GI126137898 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5262] Histone H2A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0660566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.216039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTTCTAATAT ATAATCAATA ACTAATCAAT AATGTCCGGT GGTAAAGGTA AAGCTGGCTC 
TTCTGAAAAG GCCTCCACTT CTAGATCTGC TAAGGCTGGT TTGACTTTCC CAGTCGGTAG
AGTCCACAGA TTGTTAAGAA AGGGTAACTA CGCTCAAAGA GTTGGTTCCG GTGCTCCAGT
CTACTTGACC TCCGTCTTGG AATACTTGGC TGCCGAAATC TTGGAATTGG CCGGTAACGC
TGCCAGAGAC AACAAGAAGT CCAGAATCAT CCCAAGACAC TTGCAATTGG CCATCAGAAA
CGATGAAGAA TTGAACAAGT TGTTGGGTCA CGTCACTATC GCTCAAGGTG GTGTCTTGCC
AAACATCCAC CAATCCTTGT TGCCAGCTAA GAAGGCTAAG CCAGGTAAGG CTTCTCAAGA
ATTATAAGTG TGATCGTTTT CAACGTGTCA TTGTAATTTT AATGTTTTAG TTATTCCTTT
CAAGCAGTTT GTATCATTGT TTACAGACTA GTGTACATTA GTTTTAGTTT TAATGAGGTA
GTTTATAATG GAATGTATTC TGTTAGAATA AAGTGTACAA CACATAATTG
 
Protein sequence
MSGGKGKAGS SEKASTSRSA KAGLTFPVGR VHRLLRKGNY AQRVGSGAPV YLTSVLEYLA 
AEILELAGNA ARDNKKSRII PRHLQLAIRN DEELNKLLGH VTIAQGGVLP NIHQSLLPAK
KAKPGKASQE L