| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_65879 |
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| Symbol | |
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| ID | 4840084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 366064 |
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| End bp | 366848 |
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| Gene Length | 785 bp |
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| Protein Length | 200 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391399 |
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| Product | predicted protein |
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| Protein accession | XP_001385754 |
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| Protein GI | 126138462 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5143] Synaptobrevin/VAMP-like protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0223662 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGATCT ACTACATCGG TATCTTGAGA ACAAGCGGCG AGAAAGCGCT CGAGTTGACT
TCTGCCAGAG ACCTCACCCA GTTCTCATTC TTTGAGAGAA CCGGAGTGTC CCAGTTCATG
ACCTTTTTCT CTGAAACTGT TTCCCAGAGA ACCCAGGCTG GCCAAAGACA AAGTATTGAA
GAAGGCAACT ATATCGGACA CACATACACA AGATCAGAAG GTATCGCCTG TGTTATCATC
TCAGACAAGG AGTACCCTGT CAGACCAGCA TACACATTAA TCAACAAGAT CTTGGAAGAG
TATTTGGCAT TACATCCACA ACAAGAATGG GCCAACATCT CAGCCACCAG TCCTAGCTTG
GCCTACGACC AGTTGGAACA GTACTTGAAG AAGTATCAGG ATCCATCTCA AGCTGATTCT
ATCATGAAGG TGCAACAAGA ATTGGACGAA ACCAAGATCG TCTTGCACAA GACTATCGAA
AGTGTGTTGC AGAGAGGCGA AAAGTTGGAC TCGCTTGTTG ACAAATCAGA GGCGTTGTCG
TCGTCGTCTA GAATGTTCTA CAAGCAGGCT AAAAAGACAA ATTCGTGCTG TATCATCATG
TGAATGCTCG TAACATCAAC TACTAATACT ATTCATAAGA ACAAATCTCT AGACAGCCAT
ATCAGCTCAA GTGGTTCTAA TGGTTCTAAT GGTTTTCAAT AGCTTCCATC TTGTGTCTTT
CATACATATA TCATTCTTTA TATGTCTCAT CTCTACTCTA TACCATTAAT ACACATACAT
ACATT
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| Protein sequence | MKIYYIGILR TSGEKALELT SARDLTQFSF FERTGVSQFM TFFSETVSQR TQAGQRQSIE
EGNYIGHTYT RSEGIACVII SDKEYPVRPA YTLINKILEE YLALHPQQEW ANISATSPSL
AYDQLEQYLK KYQDPSQADS IMKVQQELDE TKIVLHKTIE SVLQRGEKLD SLVDKSEALS
SSSRMFYKQA KKTNSCCIIM
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