| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62299 |
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| Symbol | |
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| ID | 4840162 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1567369 |
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| End bp | 1568886 |
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| Gene Length | 1518 bp |
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| Protein Length | 446 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640391477 |
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| Product | predicted protein |
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| Protein accession | XP_001386002 |
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| Protein GI | 150866410 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGTACC ATAACTCCGG TGGCCATCGG CCGAGAGGAG GATACCAAGG AAGCAGCTAT
AGAGGCTCTG GAGGTCAGCA GTCTGGAAGC GGAGGATACA ACAGATACAA TAACAATAAT
GGTAGCAATA GTTATGGTGG GAGAGACAGT TATATTAGCA GTGGCCACAA TGGCAGCAGC
AATTATAATG GTAGTAACAA TTATAATGGA GGTAGCAGTT ATTCCAGCAA TGTCGGCGAT
AGCAGCAATA ATGGCAATGG TTTTCAGAGA AGACCGTTCA AAAGAAATGC CTATCAAGCA
GCATACCAGT CTCAATCTCA GACTTCATCA TCTCAAAGTC AACCTCACAA TGCCTACAAT
CAGCAAGGAA ATCGTTACAA CGATACCCAA TTCCAGATCT GGATGGGAGG ATTGGATCCC
ACTTGGACAG AGGAAAGCAT TGCTAATATA TGGCAAACCG TAGGAGTGCC GCCAGTTTCT
GTCAAGATTA TGAGAGACAA GTTCAACACG ACAAAACCAC CGTATTCATT TGTTACGTTT
GCTAATGAAA AGGAAGTAGA TACTGCTGTA CAGAAAAATG GGTTGGTAAT TCCAGGATCC
GCAAGAACGT TCAAAATCAA CTATGCTGGA GGACCCAAGT CTGAAGGTCA TGGAGGAGCA
ACTTCTGGAA GCTCTAGATA CCCAGATTCG TCCAATTCAC GACAAATAGC ACCCAAAAAC
GAACACTCGA TCTTCATTGG CGATTTGGCC TTGGATGTGA CGGAAGATCT CATTTTCGCC
AAGTTCAATA CTCAGTTCCC AGGACAAGTG AAACAGGTTA AAATTATGTT CGATCAACAG
ACTGGTGCCA ATAAAGGCTT TGGGTTTGTC CGTTTCACCA ATATCGAAAT CAAAAATCGG
GCTCTCAAGG AGATGAATGG CGTAGTTGTA GGCAGTAGAG CCATAAGAGT TGGACAAGCT
AGCGGAAGCA ATAGTGGAGG ATTTTCCAGT CCAGCCCCAG AGAGCGAGAA CCATGAAATC
TCGCGTGTAC ATCTCAGTCA GTCACAGCCA GCATTGAACC AATTCACGGA CCCCAACAAC
ACTACTTTGC TGATAACAGG TTTATCATCC AAATTTACCG AGGACGAGTT GGCTTTGCAT
TTCATTGCTT TTGGCGATAT AGTAGCATGT AAACTTTCAG ACGACTTGCA GTCGGCATCG
ATCAAGTTCT TCCTGAGATC GGCTGCTGAA TGGGCCGTCT TGTTCTTACA TGGAGCCATT
ATCAATGATT GCAATATACT GATAACATGG GGTAAAGATT CCTCCACGAC GTACAAAGCA
GCTATTAAGC CACCTTTGAC TTACGGATCT TTCGATATAA ATACGCTCCG CTTGGACAAT
TTTTCTAAAC AAGAATTGTC CGAGCTCTTC ACCGTAGAAG TCAACGGAAA CAGCCCATTG
CCAGCTTCTA ATATCAATGA ATTACACGTG AAATCAAAAT TGGCAAATCA CAATTTGCTA
GAGTCTGCCT TATATTAG
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| Protein sequence | MSYHNSGGHR PRGGYQGSSY RGSGGQQSGS GGYNRYNNNN GSNSYVTIIM ERRPFKRNAY
QAAYHQPHNA YNQQGNRYND TQFQIWMGGL DPTWTEESIA NIWQTVGVPP VSVKIMRDKF
NTTKPPYSFV TFANEKEVDT AVQKNGLVIP GSARTFKINY AGGPNSRYPD SSNSRQIAPK
NEHSIFIGDL ALDVTEDLIF AKFNTQFPGQ VKQVKIMFDQ QTGANKGFGF VRFTNIEIKN
RALKEMNGVV VGSRAIRVGQ ASGSNSGGFS SPAPESENHE ISRVHLSQSQ PALNQFTDPN
NTTLSITGLS SKFTEDELAL HFIAFGDIVA CKLSDDLQSA SIKFFSRSAA EWAVLFLHGA
IINDCNISIT WGKDSSTTYK AAIKPPLTYG SFDINTLRLD NFSKQELSEL FTVEVNGNSP
LPASNINELH VKSKLANHNL LESALY
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