| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62287 |
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| Symbol | HQD1 |
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| ID | 4840231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1532827 |
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| End bp | 1533813 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640391546 |
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| Product | 6-chlorohydroxyquinol-1,2-dioxygenase |
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| Protein accession | XP_001385997 |
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| Protein GI | 126138948 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTCTC AGAAGTTGAA AATTGTAGAT ATGAGTGATG AAACCATCAC CCAGAACACC
ATAGCCATCA ATTCTCAACA TAACAATGCC AGATTCAAGT TTATATTGAA CAGCCTTGTC
CAACACCTCC ACGACTTTGC CAGAGAAACG AGATTGACTA CTAAAGAATG GGAAGCTGGA
ATCGAGTTCT TGACTCAGAC TGGGAAAATG TCTTCCGATA TAAGACAAGA GTTTGTTCTC
CTTTCTGATA TTATGGGGTT TTCTGTGTTA GTAGATAGCA TCTCCCATCC AAAGCCAGAG
GAAGCAACAA TTGGTACTTT GCTTGGGCCC TTCCACACCC ACGATGCTGA AGAACATGAA
AGTGGAACTT CCATCACTTC CGCAGATAAA GGTGAACCAC TTTTAATAGA GGGAAAACTA
ACTGACATTC GCGGTAACCC TATTGAAGGT GCCACTATTG ACTTGTGGCA CTGTGACAAA
GATGGTTTCT ATGATACTCA GTACATTGAT AGAAGTGGCC CAGATATGAG AGGAATATAC
AAGTCGAAAG CTGATGGATC ATTCGTGATT AAGGCTACCA AACCTGTACC ATATCCAATT
CCCCATGATG GACCTGTAGG AAAGTTACTC CAGAAGCTTG AGCGTCATCC TTATAGACCA
GCACATATTC ATTTCATTAT TGAAAAGGAA GGATACGATA GTTTGGTGAC AGCATTGTAT
CACAGGGGTG ATCCCTATGA GACTTCTGAT GCTGTCTTTG GAGTCAAGAC TCCTCTACTT
TTTGAGTTGG ACAGAATTGG AAAGGACAGA GCAGAAAAAT ACGGGATGAA ACAAGACGAC
TGGCTCTTAC AATGGCATTT CAAAATCATT ACTGCCGCAG AATCCAAAAA GTTAGTAGAA
GAGAAAAATA CAGAAGCCTT AAAGAAGGTG AATGTCAGAT TTACCATCAA CGAAGATGGA
CTTCCAGAGG CTGCACCATT GGACTGA
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| Protein sequence | MPSQKLKIVD MSDETITQNT IAINSQHNNA RFKFILNSLV QHLHDFARET RLTTKEWEAG
IEFLTQTGKM SSDIRQEFVL LSDIMGFSVL VDSISHPKPE EATIGTLLGP FHTHDAEEHE
SGTSITSADK GEPLLIEGKL TDIRGNPIEG ATIDLWHCDK DGFYDTQYID RSGPDMRGIY
KSKADGSFVI KATKPVPYPI PHDGPVGKLL QKLERHPYRP AHIHFIIEKE GYDSLVTALY
HRGDPYETSD AVFGVKTPLL FELDRIGKDR AEKYGMKQDD WLLQWHFKII TAAESKKLVE
EKNTEALKKV NVRFTINEDG LPEAAPLD
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