| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_62249 |
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| Symbol | SUC1.2 |
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| ID | 4839736 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 41455 |
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| End bp | 43002 |
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| Gene Length | 1548 bp |
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| Protein Length | 482 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391051 |
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| Product | Fungal transcriptional regulatory protein |
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| Protein accession | XP_001385694 |
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| Protein GI | 150866187 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0654828 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATCAGTCCTT GTGATGGCTG TTCGGTGAGA AAGGTTAAAT GTTCAGGCTC AAGACCTTGC
ACCAGATGTG TTAAGAAGGG CATCCCTTGT ACCAATAACA GGATCAAAAA GAAGTCGGGA
CCAAAGTCGA AGAAAAATGA AGATCAGACC TACTTCAGAA CAGTGCATCT TGATCTCTTC
TCGGAAACTG GAACTCACAC CAACAAACCG CCTCCAGGTG TAGACTTTTT TCCTTCTAAC
GTCCCACAGC CACAATCAGA ACCCATTCCA GCACCAATTT ATTCTACTTA TTTTGAGCCT
TCCAAGCCCA TAACGAAAGA ACTAATCCCA ATGAGTATCT TGCTCCCATA TCTTCAAGTG
TATCAAACCT GGTACTACAG TTTGTGGCCA GTATTGTCAG TGACTCATTT AGTCACCAAG
TTAACCATTC TTGAACCTGG GGAAGTACTC GATCAAGAAG GTTCAGTCTC ATATGCTCTA
TGTTTGGCAG TTTGTGCGGC AATATCGAGA AAGATTGCCT TCATAAGTGA AGACCCAAAT
ATAATACACC TACCAACGGG AGTCCGGGGT CGAGACTATG TGCTAGCAGC TCTCAGAATT
CGGAATGAAT ATGAGCATCT CCTCCATCCA ACTAGTGAGA CTTTGTTAAC TTCATTTTTC
TTGTACGTGT ACTACTTCCA TAATGAAGGT GGAATTAATG CAGCTATTAC ATACTTAAGA
GAAGCCATAT CTATGGCACA AATCATGAAC TTGCAGGACC CAGACACATA CTTAAATAAG
AGTCCTACTG AGGTGCATCG TTTACGAAAG ATATACTATA TTCTCTTAGT CACAGAAAGA
TACATGTGCA TTGAAAAGGG AATGCCTGTC ATTTTGGACT CTACCATCCA ATTTCCGATG
TCTCAAGATG AAGAGTATTC GAACCTATTG ACTGGTTTCA CTGAACTAAT TAAGATATTC
TCGATTCCAG ATCGTTCATT TTTTGAAAAA ATGAGGATGT TGCATAATAC TGGGAGTAAT
TACGATAATC TAAGAAATTT CTTCCATTTC CCGATAAACA ACATTACCGA AGGATGGGTA
ATAGATGTTG ACAATAAAAT CAAAGGAATT TCCATAAAAA ATAGTGCTGC AGATATTCAG
AAGGCTAATT TCTTGCTCTC TAAACACTGG ATGAGGTCAT TGGTTTGGCA TGTAGCTTTC
CAAAATGGAC TCGTAACCTA TAATCGAGAG GACGCTGACT GTCTTAGTGT CAAATATCCT
GTTACTATTG CATACGAGTT CTTGGCTTCT ACTAGTAACT TGCCAATGTA TGCATTCGAA
TCGAATGGAC CCCAAGTTGT TGTTAAATTG CTAGAAATAG CTAATGGGAT GGCTGATACA
ATGAATGATC TCGCCTTCTT AAAGGATGGT TACGATACGT TTGCATGTCT GAATGCTTTG
AATTCGATAT TTTGGTTCAT CTCCAGGTTT AAGATAGATG TTAGTTTGCC TATGCAGTTG
TATCATAAGA TTGAGAGCAT TGTCAATGCA AGCCCTATTC CAAAAATG
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| Protein sequence | ISPCDGCSVR KVKCSGSRPC TRCVKKGIPC TNNRIKKKSG PKSKKNEDQT YFRTVHLDLF
SETGTHTNKP PPELIPMSIL LPYLQVYQTW YYSLWPVLSV THLVTKLTIL EPGEVLDQEG
SVSYALCLAV CAAISRKIAF ISEDPNIIHL PTGVRGRDYV LAALRIRNEY EHLLHPTSET
LLTSFFLYVY YFHNEGGINA AITYLREAIS MAQIMNLQDP DTYLNKSPTE VHRLRKIYYI
LLVTERYMCI EKGMPVILDS TIQFPMSQDE EYSNLLTGFT ELIKIFSIPD RSFFEKMRML
HNTGSNYDNL RNFFHFPINN ITEGWVIDVD NKIKGISIKN SAADIQKANF LLSKHWMRSL
VWHVAFQNGL VTYNREDADC LSVKYPVTIA YEFLASTSNL PMYAFESNGP QVVVKLLEIA
NGMADTMNDL AFLKDGYDTF ACSNALNSIF WFISRFKIDV SLPMQLYHKI ESIVNASPIP
KM
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