| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61628 |
|---|
| Symbol | MGS1 |
|---|
| ID | 4840046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 741127 |
|---|
| End bp | 743370 |
|---|
| Gene Length | 2244 bp |
|---|
| Protein Length | 747 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640391361 |
|---|
| Product | DNA-dependent ATPase MGS1 (Maintenance of genome stability protein 1) DNA-directed DNA polymerase ATPase |
|---|
| Protein accession | XP_001385499 |
|---|
| Protein GI | 150866032 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.17782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAA CTTGTCCGAT CTGTGGAAAA CAGCTCTCCC TGCACTTGCT AGAAAGACAT
GTCAATACTT GCCTAGATAA CCAGGAATCA AAAGAAGTAG AAGAAGTGGA GCAACCTAAA
GATGTCCAAG ATTTAGACGA AGTCGTAATA GTGGAAGATG AAATAGGCGA AATCAGGAAA
AGGCGACATG GTAGTGACGC GTTTGCTGCT CTAGGCTTGA AAATGGACTC ATCGCAAAAG
AGACAAAAGC TAGAGCGACT GCAAAAGAGC AAACCAACCT TAACTCGTAT TCTTATAGAA
GAGAAACGAT TAAAGTCTGA ATCACGTAAG ACGTCGGATG AGCTTAAAGA ACAATTGGAA
AAATTGTCTT CAAGCAAATC TTATGATGAA TCATTAATCT CAACACCATC AGATCAGCCA
AAAGTTGTAC CAGAACCTCA GGAAGAACCA AAAGAAGCAA AACCACCACC ACTTCAATCA
GATATACTTA CCAGGGCACA AGAATTGAAC AAACTCAAAC GTGAAGCAAG TATTCCGTTG
GCTCATAGAC TAAGACCCAA ATCACTAGAC GATTTCTTTG GCCAGGAGAA ACTTTTAGGA
CAAGATGGGA TATTACGTAA TATTATTAAT GCCGATAACA TACCATCGTT TATACTCTGG
GGAGTACCAG GAGTAGGAAA AACGTCATTG GCCAGAATAA TTGCACACAC AACAAATTGT
AAATTTGTAG AATTGTCTGG TGCAGAAAGT AATGCCAAAA GACTAAAAGA AGTGTTTCTC
CAGGCAGAAA ATGAAAAGCA TTTGACTGGC AGAAAGACCA TTTTATTCTT GGACGAGATC
CATAGATTCA ATAAAGCTGT ACAAGATTTG CTCCTTCCTG TGATTGAGAA GGGTGTTCTC
ACAGTTATTG GTGCCACTAC AGAGAATCCT TCTTTCACAT TAAACAATGC CTTGCTTTCA
CGAATGCATA CGTTTGTAAT GGAACAATTG ACCACAGCAG CGCTAATTAA GATTCTTGCT
AGGGCACTTT ATCAAGTCAA TAAACTTAGA AAGCATCTCT ATAATCTCCA TTACATCTCA
CTTAAAAGAG ATTCTTTTAA GTACATTGCA GAACTTTCGA TGGGAGATTC TAGAGTGGCA
CTCAATCTCT TGGAGTTCGT CAACGCGTAT TTGTCTACCG ATAAGTTTTC GACTAAAAAT
GGTGAAGAGC AGCCCAAGAA AATGGGAGTT ATCAACGTCT CCGCTGAAAG CCTCAAGAGT
ATACTTAAGT CTAGAGACTT TCATAACATG TACGATAAAC AAGGGGAATC GCACTATGAT
ACAATTAGTG CATTCCATAA ATCAGTAAGA GGTTCTGATG CTGATGCTGC GATGTTTTAC
TTGGTCAAAA TGTTATCTGG TGGAGAAGAC CCTCTCTTCA TTATTCGTAG AATGATAGTA
ATGGCTAGTG AAGATATCGG ATTGAGAGAT AGCTCATGTT TGCCCTTTGC CATTGCAGCC
AAAGAAGCGC TAGAGTTTGT AGGTATGCCT GAAGGAGAAA TCATTCTCGC TCACTGCGCA
ATGAAAATGG CCAGAGCACC AAAATCAACA AAATCATACA GAGCACTTAG AACTGCACAG
CTGCTTCTTC GGGAGAAGCC AGAAATTACT AAGCTTCCTA TTCCCATGCA TTTGAGGAAT
GCTCCAACCA AATTAATGAA AGAACTTGGT TATGGGGATT CCTATAAATA CAATCCAGGC
TACAAGAATG GTTTAGTCAA ACAAACGTAC TTCCCTGAAG GAATGGAAGA CGTTCACTTT
TTAGAAGAAA CGCACTTGGG GGTAGTTGAA GATTCTGATA CTTCCCCTGA AGAACAAGCA
AGGGCACAAG CACAAGTAGT CGACTACGAG AATTTTAAGA AAGACCGCAT AAAGCAGTTG
AAGTTGGAAT ACTTGAATCG TGTGAAAGCG ACAAGACAAG AGACCTTCAA TAAAATGATG
GCTAGATATA AGAAAAACGA AATCACAACA GTACCAGAGG TGCCTCAATA TATTGATACT
AATTCTAACG GTAAAAAAGA ACAAGGGAAA GAGAAAATTA GTGAACAGGA TTCAAGTTCA
GATACCGATT ACAAAGACAA TTTCGAAAAG TCATATGACG AATTTCTTGA TCCAGAATCA
CAACCTGAAT ATTTTGAAGG AGACGACACA GGGTACCATT ACGATCCAGA GTACCCATTG
ATTAGAGACG ACTATGAAAT CTAA
|
|---|
| Protein sequence | MDSTCPICGK QLSSHLLERH VNTCLDNQES KEVEEVEQPK DVQDLDEVVI VEDEIGEIRK
RRHGSDAFAA LGLKMDSSQK RQKLERSQKS KPTLTRILIE EKRLKSESRK TSDELKEQLE
KLSSSKSYDE SLISTPSDQP KVVPEPQEEP KEAKPPPLQS DILTRAQELN KLKREASIPL
AHRLRPKSLD DFFGQEKLLG QDGILRNIIN ADNIPSFILW GVPGVGKTSL ARIIAHTTNC
KFVELSGAES NAKRLKEVFL QAENEKHLTG RKTILFLDEI HRFNKAVQDL LLPVIEKGVL
TVIGATTENP SFTLNNALLS RMHTFVMEQL TTAALIKILA RALYQVNKLR KHLYNLHYIS
LKRDSFKYIA ELSMGDSRVA LNLLEFVNAY LSTDKFSTKN GEEQPKKMGV INVSAESLKS
ILKSRDFHNM YDKQGESHYD TISAFHKSVR GSDADAAMFY LVKMLSGGED PLFIIRRMIV
MASEDIGLRD SSCLPFAIAA KEALEFVGMP EGEIILAHCA MKMARAPKST KSYRALRTAQ
SLLREKPEIT KLPIPMHLRN APTKLMKELG YGDSYKYNPG YKNGLVKQTY FPEGMEDVHF
LEETHLGVVE DSDTSPEEQA RAQAQVVDYE NFKKDRIKQL KLEYLNRVKA TRQETFNKMM
ARYKKNEITT VPEVPQYIDT NSNGKKEQGK EKISEQDSSS DTDYKDNFEK SYDEFLDPES
QPEYFEGDDT GYHYDPEYPL IRDDYEI
|
|---|
| |