| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_61494 |
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| Symbol | CSD1 |
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| ID | 4840306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 382568 |
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| End bp | 383860 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391621 |
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| Product | cysteine desulfurase Selenocysteine lyase |
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| Protein accession | XP_001385424 |
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| Protein GI | 150865982 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0727802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACACAGA CTGTGCCTTT TGGCAAGAAA TTCAAAGAAA CCTACTTCAC TAACATCAAT
CCACAGTACA CTGCAGTGAA CCATGGTTCG TACGGATTGT TCCCTGACAA GATCTTCCAC
AGATATGTGG AGGAAATGAA AAAAGATTTG TACAATCCTG ACAATTACGT GAAGGTGCAA
CAACCCGAAA CGTACAAGAA GGCACTTCAG ACGCTTGGAG AGTTTTTTCA TTGTGACTAC
CGCAATCTTG CTCTTGTTGA CAATGCTACC ACTGGGGTAA ACACTATTTT GAGAAGTTTC
CCCTTGGATA AGGGTGACAA AATCGTCTAT CCCAGTACCA TATATGGTGC TTGTGGCCTA
ACCATCAAAT TCATGGTCAA TCGGTATGGC ATTGAAGCTG TTCCTATTGA GTTGGTCTAC
CCATTGGAAG AAACAGAGAT TTTGTCCAAG TTTGAAAAGG TGTTCAAAGA ACAGAAGCCC
AAGATCGCTC TCTTCGATGT GGTTATCTCT ATGCCAGGGG TCAAGTTCCC CTACGAGGAA
ATGACCGAAT TATGTCGCAA ATATGGAGTC TTGTCCTTGA TTGACGGCGC TCATTGTGCT
GGGTTGAATC CTATTGACTT GGGTAAGTTG AGGCCAGATT TCTTCGTCAC CAACTTGCAT
AAGTGGCTCT TTGTTCCTCG TGTGTGTGCT TCTTTGTACA TTGATAAAAA GCACCACCGT
AGTGTTCATA CTCTTCCTGT TAGCCACTCG TACTTGGATG ACAATTCCAA GGTCAGTGCT
GAGGATGAAG AGAACTGGTT GGTTGATAGG TTTACCTTTA TTGGAACCAA GAACTTTGCT
TCAATCGCTG TTATTGGTGA CTGTATCAGG TTCAGACAAG AAGAATGTGG AGGTGAACAA
GCCGTCTATG ACTATTGTCA TTCTCTTGCT ATTAAGGCTG GTGATGCCGT AAGCAAAATA
TGGGGAGGTC CTGTCTTGCA AAATAAAGCA AAGACATTGG TCAGCACGAT GGTTACTGTA
GAACTACCAC TCGAGCAGTT TGGTTTGCTG ATCACTGATT TTACTGGCAA TTATGTTGAA
ACCATTGAAT ACGTTTTTGG AAGAGAGTTT CAAGAGTATA ACACGTATGT GCCAGTTATT
GTCCACAACA AGAAGATGTA CGGGCGCTTC TCGGCACAGG TATATACGGA ACTCTCCGAT
TTCGAAGTTG CTGCCAGAAA GGTTGTCGAA GTATTTAACA CATTAGCTGA TGATCCGAAG
TTTAGAAAGT TGTCGGGGAA GTCGAAGTTA TAG
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| Protein sequence | MTQTVPFGKK FKETYFTNIN PQYTAVNHGS YGLFPDKIFH RYVEEMKKDL YNPDNYVKVQ
QPETYKKALQ TLGEFFHCDY RNLALVDNAT TGVNTILRSF PLDKGDKIVY PSTIYGACGL
TIKFMVNRYG IEAVPIELVY PLEETEILSK FEKVFKEQKP KIALFDVVIS MPGVKFPYEE
MTELCRKYGV LSLIDGAHCA GLNPIDLGKL RPDFFVTNLH KWLFVPRVCA SLYIDKKHHR
SVHTLPVSHS YLDDNSKVSA EDEENWLVDR FTFIGTKNFA SIAVIGDCIR FRQEECGGEQ
AVYDYCHSLA IKAGDAVSKI WGGPVLQNKA KTLVSTMVTV ELPLEQFGLS ITDFTGNYVE
TIEYVFGREF QEYNTYVPVI VHNKKMYGRF SAQVYTELSD FEVAARKVVE VFNTLADDPK
FRKLSGKSKL
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