Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_61383 |
Symbol | |
ID | 4839864 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1262851 |
End bp | 1264001 |
Gene Length | 1151 bp |
Protein Length | 250 aa |
Translation table | 12 |
GC content | 42% |
IMG OID | 640391179 |
Product | predicted protein |
Protein accession | XP_001385936 |
Protein GI | 126138826 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.235012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GGCACTGGTT ACGATTTATC CAACAGTGTT TTCTCTCCAG GTAAGTATAG GAAATTCTTG GTGGCATGAT ACGAATGGCA ATCTATGATA TGGTGATATG ATATTGTGAT ATTATGATAC TTTACGGTGT TGATAGGTTG ATAAGATGTG ATAATACGAT GGAAGCTATC GCAAATTATG TGGTGATGAA ATTGAAAGTA GTGTGATGGA TATCGATATA TCTATTGGAA TTGATTGAGA CTTGTCCCTT GTACTTCTTT GATGTTGAAA TAATGTTCAT TTTACAATTC CTGATGTTTC TTGACATTGT AATCCTACTG GTATCCACAT TGACATTATT CCTTCTTTCA TATCGTGTTG ATATCGATAC CATATTTCAT TTCATTGACG TCATCAATAC TTCGTATTCT TCAAAGTTCG GTTTACTAAC ACATTTAGAT GGAAGAAACT TCCAGGTCGA ATACGCCATG AAGGCAGTGG AAAACGGCGG AACATCTATC GGAATCAAAT GCAAAGACGG AATAGTGTTG GCAGTAGAAA AGATCATAAA CTCGAAGTTG TTGGTCCCTG GCAAGAATAA AAGAATCCAG ACCATTGACA GACACATTGG TGTAGTGTAC TCGGGGCTTT TACCCGACGG CCGTCATTTT GTGAATAGAG GCAGAGACGA AGCTCAGTCG TTCAAGTCCA TATATAAGAC TCCAGTTTCG GTGCCTCACC TCATGGACAG ATTGGGCATC TACGTGCAAA ACTACACTTG CTACAACTCC GTTAGACCGT TTGGTGTTGT TTCTATTGTA GGAGGAGTAG ATGAAAACGG ACCCCATTTG TACATGATTG AGCCCAGTGG CTCATGCTGG GGCTACTCTG GCGCTGCAAC TGGTAAAGGT AGACAGACAG CCAAGTCTGA GTTGGAAAAG TTGAACTACG ATGAGTTGAC TGCGAGGGAA GCCGTCAAGT CTGCTGCCAA GATTATCCAT CTCGCTCACG AAGACAACAA GGACAAGGAC TACGAGTTGG AAATCTCCTG GATTTCTATT GAAGAAACTA AGGGAAGGCA TGAATTCGTT CCTGATGACT TGTTCGAAGA AGCTAAGAAG TATGCTGAAG AGGACGATGA AGAGGACGAG GACGAGGAGA TGGAATCGTA G
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Protein sequence | GTGYDLSNSV FSPDGRNFQV EYAMKAVENG GTSIGIKCKD GIVLAVEKII NSKLLVPGKN KRIQTIDRHI GVVYSGLLPD GRHFVNRGRD EAQSFKSIYK TPVSVPHLMD RLGIYVQNYT CYNSVRPFGV VSIVGGVDEN GPHLYMIEPS GSCWGYSGAA TGKGRQTAKS ELEKLNYDEL TAREAVKSAA KIIHLAHEDN KDKDYELEIS WISIEETKGR HEFVPDDLFE EAKKYAEEDD EEDEDEEMES
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