Gene PICST_61327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61327 
Symbol 
ID4839930 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp522095 
End bp522568 
Gene Length474 bp 
Protein Length149 aa 
Translation table12 
GC content45% 
IMG OID640391245 
Productpredicted protein 
Protein accessionXP_001385450 
Protein GI150866001 
COG category[B] Chromatin structure and dynamics 
COG ID[COG5531] SWIB-domain-containing proteins implicated in chromatin remodeling 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.86289 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
AAAAGTATCA ATGACCTAAT ATTGGGTCGG TACTACGACT TGGTGGACAA GCGAGCCGAG 
GAAGAAAAGT ACGAGAAGAA GAGACTAGAA GAAATAGGAC GGCAGGATGC GTTGATGGCT
GCTCGGTTAC TGAAGTCCGA GATTAATGGG CCAGTGATGC GTGCCAGAAC GGTGCTAGCG
AAGCGGAAGG TTGACACGAA AAAGAAGGAG AAGAAGAAGC GTGAAGCTGG CACTCTTGCC
AAAACTGGAT TCAACAAGGA AATGGTGTTA TCTACTGAAC TTCTGGATAT CCTTGGGATT
TCGCGAACTT CACGACCACA AGTAGTGAAG CAGCTCTGGA TATATATCAA GGACAACGAG
CTCCAGAATC CCGACGATAA ACGGCAGATC ATGTGCGATG AAAAACTCCA GAAGTTGTTC
AAGAAGAGTA TGTGTAATTT TTGTTTAGAG ATCTTCGTGA TATTTCTGTA CTAA
 
Protein sequence
KSINDLILGR YYDLVDKRAE EEKYEKKRLE EIGRQDALMA ARLSKSEING PVMRARTVLA 
KRKKKREAGT LAKTGFNKEM VLSTELSDIL GISRTSRPQV VKQLWIYIKD NELQNPDDKR
QIMCDEKLQK LFKKSMCNFC LEIFVIFSY