| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_49071 |
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| Symbol | |
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| ID | 4839790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1220640 |
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| End bp | 1225016 |
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| Gene Length | 4377 bp |
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| Protein Length | 1458 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391105 |
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| Product | predicted protein |
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| Protein accession | XP_001385586 |
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| Protein GI | 150866101 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGACT ACGATCTCGA AGAGAACCAT CTCGTACGGC AGAACAGATT GCTATCGTCG
CTCTTCAGCA AAGAACTACC ACCCATACCT GAGGACGACG AGCGACCCGA ACACCCAGAA
CGCGATGCCA ACTTCTTCTC CAAGATCTTC TTCTGGTGGA TGATTCCCGT CATGAACACC
GGATACAAGA GAACGTTGAC ACCCAAGGAC TTGTTCACGT TGTCAGATGA CATCAAGGTC
GAAACCATGG CTGCCAGGTT CATGGCCATA TTTACTCTGG ATGTAGAAAG AGCCAAGCTC
AAACATGTCA AGAAGAAATG CAAAAAGAGA GGCGAAACCT TAGAATCCAG TAGTGTTGAC
TTTGACACTG ACGTCGAAGA CTTCAAGGTC AGTCCCATCA TGTTCTTCTT CACTATCTGG
AAAACGTATA AATATCAGTA CTTTGCTGCA TCTGTATGTC TCGCCATAGC CAATAGTGCC
CAGGCTGTCA ACCCGTTGCT TTTCAAGAAG TTAATTACCT ACGTTGGCTT GAAGGCTTAC
GGTATCGAAC AAGGTGTAGG TAAAGGTGTT GGCTATGCCA TCGGCTCGTG TCTTATAGAA
TTTCTTGGTG CTGTGTTGTT TAACCATTTC TTCTACAAGG CCATGATGAC CGGTGCTGAG
ACTAAAGGTG TGTTGACCAA GGCTCTTTTG GAAAAGTCGT TCCGTTTGAG TGCTGAATCC
AAACACAAGT TCCCTGTAGG TAAGATCACT TCCATGATGG GAACGGACTT GTCGAGAATA
GATCTTGCTC TTGGTTTACA GCCTTTTATC TTTGTATTCC CTATTCCCAT CGTGATATCT
ATAGCTATCT TGATTGTCAA TATCGGTGCT GTTGCTTTAA TCGGTATCGG TGTCATGCTT
CTCTTCATGG CCGTTATTGG GGGCACCACA GCTAAATTGT ACAGTTACAG AACCAAAGCT
AACAAGTACA CCGATATACG TGTCAGTTAC ATGAAAGAAG TGTTGAACAA CTTGAAGATG
ATCAAGTTCT ACTCCTGGGA ACCTCCCTAC TATGAAAACA TTTCTTCAAC GAGAACTAAG
GAAATGGATA TTATCTACAA CATGCAAACG TTGAGAAGTA TTGTCACTGC TCTTGCCATG
TCTTTGACTG GTTTTGCTTC GTTGGTAGCC TTCTTAGTCT TGTTTGCTGT CGATAACGAC
AGAAAGAACC CTGCTTCTAT TTTCTCTTCT ATATCTTTAT TCAACGTGTT GTTGACCCAA
GTGTTTATGT TGCCCATGGC TTTGGCTACC AGTGCTGATG CCTTTGCTGG TGTTGGTCGT
GTATCCACGT TCTTGACTAC TGGAGAAGTT GACCCCAAGG AACTTGAAAC TGATATTAGT
GCTGATGTCC TCCAAAGAAT GGACAAAGAA GACGTTGTTA TTGAAGTCAA CAATGCCAGC
TTCGAATGGG AAATTTTTGA GGACATAGAA GAAAAGGACC CAAAGAAGGA AAAGGAAGAA
AAGAAAAAAG CAAAGAAGGC TGCTAAAGAA ACAAAGAAGT TGGCGAAGCA GGCCAAGAAT
TCCCAAACAA TTACTCCTTC AGAAGAAGAG TTGTCAAAGA TTGATAGTCC CAAGTTCACT
GAAAAGGAGC TTTCAACAGA ATCAAAGTCT GTCGAAGAAA AAGTCTTTGC TGGCTTGAAC
AATATCAACT TGTCGATTAA GAAAAACGAA TTCGTTGTTA TCACTGGTAT GATTGGATCA
GGTAAGACAT CTTTATTAAA CGCCTTGTCT GGTTTCATGA AGAAGACTTC TGGTGAAGTC
CTTGTCAGTA GTTCCTTATT GTTATGTGGA TATCCATGGA TTCAAAATAC TACTGTTCGT
GAAAACATTG TCTTCGGTTC TGAATGGGAC GAAGAGAAAT ATAACAGAGT TATTTTTGCT
TGTTCATTAG AAAGTGATAT CGAAATTTTG CCTGGTGGTG ATCTTACTGA AATTGGTGAA
AGAGGTATCA CCCTCTCGGG TGGCCAGAAG GCCAGAATCA ATTTGGCTAG AGCTGTCTAC
GGTGGAAGAG AAATCATTCT TATGGATGAT GTATTGTCTG CTGTTGATGC CAGAGTAGGT
AAACATATCA TGAACAACTG TATTCTTGAT TTGTTGAAAG ATAGCACTAG AATATTGGCC
ACACATCAGT TGTCACTTAT TGACTCTGCT GACAGAGTGA TTTTCTTAAA TGGTGATGGT
TCCATTAGTG TTGGTACTAA CGAAGAACTC CAGAAGTCTA ATCCAGGTTT CGCAGCTTTG
ATGGCCCATA ATGCAAAGAC TGAAGAAGAT GATGAAGACG AAAAGATCGA CGTTGATCTT
GACAAGCAAA AGTTCGAAGA ACACCACGAG GTTGAAAAAG AACTCATTCA GCGTCAAGTT
ACGAGAGCCT CTGCTGTAGA TGAAGAAGCT ATTCGTAAGG ACTACAATAA GAACGTTGAA
GAAGATGGAC ATTTAATAGA AGATGAAGAC AGAGGTGTCA ACGCAATTGC TTTAGATGTC
TACTTGACAT ATGTCAAGCT TGGCTCTGGC AAGTACACTG CATGGGGTAT TGTGCCTCCG
ATGTTGGTTT TCATGGCTCT TGCTACTTTC TGTCAAATCT TCACCAATAC CTGGTTGTCC
TTTTGGACTG AGAATAAGTT TTCTGGCAAG GACGACAACT TCTACATTGG TATCTATGTG
ATGTTCACAG TATTGTCTTT TGTCTTTTTG GCTTTAGAGT TCATGTCGTT GGTATACATG
ACCAATACTG CTGCTGTTAA GTTGAATATT GCAGCTGTGC AAAAAGTTTT GAAAGTCCCT
ATGGCTTTTA TGGACACTAC ACCAATGGGT AGAATCTTGA ATAGGTTTAC AAAGGATACA
GACGTGCTTG ATAACGAAAT TGGAGAACAA ATCAACTTTG CTTTGTTCAT GCTCAGCAAC
GTTGTTGGTA TCATTATATT GTGTATTATC TATTTGCCAT GGTTTGCTAT TGCTGTTCCA
TTCCTTGGTT TCATGTTCAT CGCAGTTTCC AACTACTATC AAGCGTCTGC CAGAGAAATT
AAAAGACTTG AGGCTGTTCT GAGGTCTTTT GTTTACAACA ACTTTAATGA AGTCTTGAAT
GGTATCAATA CTATAAATGC GTACAAGGCT GAATCAAGAT TTGTGGCAAA GAATGACCGT
TTGATCAATG GAATGAACGA GTCATACTAT CTCACTATTG GTAACCAGCG TTGGTTGGGT
ATTCAAATGA ACATTATTGC TGTTTTGTTT TCGTTATTGA TCGCTTTGCT CTGTGTTAAT
AGAGTGTTTA AGATCAGTCC TGCTTCGGTT GGTTTGTTGT TGTCTTACGT TTTCCTGATT
GGTGGTACGT TGTCTATGCT CATCAGAACA TTCACACAAG TTGAAAACGA AATGAACTCA
GTAGAAAGAA TATCCTACTA CTCTTTCAGT CTTCCTCAGG AAGCTCCAAG TTATATCACA
GAAAACTCTC CTCCTCCCGA ATGGCCGGCC AAGGGTGAAA TTCATTTCAA AGATACTTCT
TTGGCCTATA GACCAGGCTT GCCATTGGTC TTGAAGAACT TGAACTTCAG CATTAAAGGA
TCGGAAAAGA TCGGAATCTG TGGTAGAACT GGTGCTGGTA AGTCATCCAT TATGACAGCC
TTATACAGAT TGTCAGAATT AGACGGGGGT AGCATTGTGA TTGATGATAT TGACATTTCA
ACTCTTGGAT TGCATGATTT GAGGTCGAAG CTTTCCATCA TCCCTCAAGA CCCTGTGATG
TTTAGAGGTA CAATTAGGAA GAACTTGGAT CCTTTCGATC AAAGTACAGA TGATCAATTG
TGGGGTGCTT TGGTGCGGAC TGGATTGGTC GAAGCAGATA GGTTGGATGT GGTCAAGGCA
CAGGTCAAGG TTCAAAAAGA AGATAAATCA GACCATGGGG ATAATAATAA TGGTGCCGAC
AAGAAAGGTG CAGAAGAAGG CAGTATTCTT CACAAATTTC ACCTTGACCA AATGGTTGAA
GACGAAGGTG TTAACTTTTC GTTGGGTGAA AGGCAATTAA TTGCATTTGC CAGAGCTTTG
GTGAGAAACT CCAAGATCTT GATTTTGGAT GAAGCCACAT CATCTGTTGA TTATGAAACT
GATGCCAAGA TTCAAAACTC GATCGTCAAC GAATTTGCTG ATTGTACAAT CTTGTGTATC
GCTCACAGAT TGAAGACGAT TATTAATTAC GACAAAATCT TGGTTTTAGA TAAGGGTGAG
ATTAAAGAGT TCAATACTCC TTGGAACTTG TTCAAGACAA AGGATAGTAT TTTCCAACAA
ATGTGTATCA AGTCTAATAT TGTTGAGGAA GATTTTCACA GGGTTTCTAA GTTTTAG
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| Protein sequence | MSDYDLEENH LVRQNRLLSS LFSKELPPIP EDDERPEHPE RDANFFSKIF FWWMIPVMNT
GYKRTLTPKD LFTLSDDIKV ETMAARFMAI FTSDVERAKL KHVKKKCKKR GETLESSSVD
FDTDVEDFKV SPIMFFFTIW KTYKYQYFAA SVCLAIANSA QAVNPLLFKK LITYVGLKAY
GIEQGVGKGV GYAIGSCLIE FLGAVLFNHF FYKAMMTGAE TKGVLTKALL EKSFRLSAES
KHKFPVGKIT SMMGTDLSRI DLALGLQPFI FVFPIPIVIS IAILIVNIGA VALIGIGVML
LFMAVIGGTT AKLYSYRTKA NKYTDIRVSY MKEVLNNLKM IKFYSWEPPY YENISSTRTK
EMDIIYNMQT LRSIVTALAM SLTGFASLVA FLVLFAVDND RKNPASIFSS ISLFNVLLTQ
VFMLPMALAT SADAFAGVGR VSTFLTTGEV DPKELETDIS ADVLQRMDKE DVVIEVNNAS
FEWEIFEDIE EKDPKKEKEE KKKAKKAAKE TKKLAKQAKN SQTITPSEEE LSKIDSPKFT
EKELSTESKS VEEKVFAGLN NINLSIKKNE FVVITGMIGS GKTSLLNALS GFMKKTSGEV
LVSSSLLLCG YPWIQNTTVR ENIVFGSEWD EEKYNRVIFA CSLESDIEIL PGGDLTEIGE
RGITLSGGQK ARINLARAVY GGREIILMDD VLSAVDARVG KHIMNNCILD LLKDSTRILA
THQLSLIDSA DRVIFLNGDG SISVGTNEEL QKSNPGFAAL MAHNAKTEED DEDEKIDVDL
DKQKFEEHHE VEKELIQRQV TRASAVDEEA IRKDYNKNVE EDGHLIEDED RGVNAIALDV
YLTYVKLGSG KYTAWGIVPP MLVFMALATF CQIFTNTWLS FWTENKFSGK DDNFYIGIYV
MFTVLSFVFL ALEFMSLVYM TNTAAVKLNI AAVQKVLKVP MAFMDTTPMG RILNRFTKDT
DVLDNEIGEQ INFALFMLSN VVGIIILCII YLPWFAIAVP FLGFMFIAVS NYYQASAREI
KRLEAVSRSF VYNNFNEVLN GINTINAYKA ESRFVAKNDR LINGMNESYY LTIGNQRWLG
IQMNIIAVLF SLLIALLCVN RVFKISPASV GLLLSYVFSI GGTLSMLIRT FTQVENEMNS
VERISYYSFS LPQEAPSYIT ENSPPPEWPA KGEIHFKDTS LAYRPGLPLV LKNLNFSIKG
SEKIGICGRT GAGKSSIMTA LYRLSELDGG SIVIDDIDIS TLGLHDLRSK LSIIPQDPVM
FRGTIRKNLD PFDQSTDDQL WGALVRTGLV EADRLDVVKA QVKVQKEDKS DHGDNNNGAD
KKGAEEGSIL HKFHLDQMVE DEGVNFSLGE RQLIAFARAL VRNSKILILD EATSSVDYET
DAKIQNSIVN EFADCTILCI AHRLKTIINY DKILVLDKGE IKEFNTPWNL FKTKDSIFQQ
MCIKSNIVEE DFHRVSKF
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