| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_48891 |
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| Symbol | VMA2 |
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| ID | 4839794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1236837 |
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| End bp | 1238363 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391109 |
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| Product | Vacuolar ATP synthase subunit B (V-ATPase B subunit) (Vacuolar proton pump B subunit) (V-ATPase 57 kDa subunit) |
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| Protein accession | XP_001385931 |
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| Protein GI | 126138816 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1156] Archaeal/vacuolar-type H+-ATPase subunit B |
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| TIGRFAM ID | [TIGR01040] V-type (H+)-ATPase V1, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.160397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTCA CTGACCAGGA ATTGTTCGAG TTGAACAAAA GAGCCGTCAC CCAGGGGTTC
AAAATCAAGC CCAGAATCAA GTACAACACC GTTGGAGGTG TCAATGGGCC CTTGGTGATT
TTGGACAATG TCAAGTTTCC CCGTTACAAC GAGATTGTCA ACTTGACTTT GCCAGACGGC
TCCATCAGAC AGGGGCAAGT TTTGGAAGTC AGAGGATCTA AGGCTATTGT CCAAGTTTTC
GAAGGTACTT CCGGTATCGA TGTCAAAAAG ACCCGTGTTG AGTTCACCGG CGAGAACTTG
AAGATTGCTG TTTCTGAGGA TATGCTTGGA AGAATCTTTG ATGGTTCCGG TAGACCGATC
GATAAGGGCC CCAAGATCTT TGCCGAAGAC TACTTGGACA TTAACGGTTC TCCAATCAAT
CCTTTTGCCC GTATCTACCC AGAAGAAATG ATCTCTACCG GTATCTCTGC CATCGATACC
ATGAATTCCA TCGCCAGAGG CCAGAAGATT CCTATTTTCT CTGCTTCTGG TTTGCCTCAC
AACGAAATCG CCGCTCAAAT CTGTAGACAA GCCGGTTTGG TTAGACCTAC CAAAGACGTT
CACGACGGTC ATGAAGAGAA TTTCTCCATT GTCTTTGCTG CTATGGGTGT GAACTTGGAA
ACATCCCGTT TCTTCAAGCA AGATTTCGAG GAAAACGGGT CCTTAGAAAG AACTTCGTTG
TTCTTGAACT TGGCCAACGA TCCAACCATT GAAAGAATCA TTACGCCTCG TTTGGCTTTA
ACTACCGCTG AATATTTGGC CTACCAAACT GAGAGACATG TCTTGACTAT CTTGACGGAT
ATGTCCTCAT ATGCTGATGC ATTGAGAGAA GTCTCTGCTG CTAGAGAAGA AGTCCCTGGT
AGAAGAGGTT ATCCCGGTTA CATGTACACC GATTTGTCTA CTATCTACGA AAGAGCTGGT
AGAGTTGAAG GCAGAAACGG TTCCATCACC CAGGTGCCTA TCTTGACTAT GCCTAACGAC
GATATTACCC ATCCTATTCC TGATTTGACT GGTTATATCA CTGAAGGTCA GATCTCTATC
GACAGACAAT TGCACAACAG AGGAATCTAT CCTCCTATCA ACGTGTTACC ATCTTTGTCT
CGTTTGATGA AGTCTGCAAT TGGTGAAGGT ATGACTAGAA AGGACCACGG TGATGTTTCT
AACCAGTTGT ATGCCAAATA CGCCATTGGT AGAGACGCCG CTGCAATGAA AGCAGTCGTT
GGTGAGGAAG CCTTGTCTAA CGAAGACAAG TTGTCGTTAG AATTCTTGGA GAAGTTTGAA
AAGAACTTCA TCTCCCAGGG AGCCTACGAA AACAGATCCA TTTTCGAGTC GTTAGACTTG
GCCTGGTCGT TGTTGAGAAT CTACCCCAAG GAATTGTTGA ACAGAATTAG TCCTAAGATC
TTGAACGAGT TCTACGAAAG AGAAAGGGAA CAGGAGGATG ATGAAGAAGA AGACGCAGAC
AAGTCCCACG ACTTGATTGA CGCCTGA
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| Protein sequence | MSLTDQELFE LNKRAVTQGF KIKPRIKYNT VGGVNGPLVI LDNVKFPRYN EIVNLTLPDG
SIRQGQVLEV RGSKAIVQVF EGTSGIDVKK TRVEFTGENL KIAVSEDMLG RIFDGSGRPI
DKGPKIFAED YLDINGSPIN PFARIYPEEM ISTGISAIDT MNSIARGQKI PIFSASGLPH
NEIAAQICRQ AGLVRPTKDV HDGHEENFSI VFAAMGVNLE TSRFFKQDFE ENGSLERTSL
FLNLANDPTI ERIITPRLAL TTAEYLAYQT ERHVLTILTD MSSYADALRE VSAAREEVPG
RRGYPGYMYT DLSTIYERAG RVEGRNGSIT QVPILTMPND DITHPIPDLT GYITEGQISI
DRQLHNRGIY PPINVLPSLS RLMKSAIGEG MTRKDHGDVS NQLYAKYAIG RDAAAMKAVV
GEEALSNEDK LSLEFLEKFE KNFISQGAYE NRSIFESLDL AWSLLRIYPK ELLNRISPKI
LNEFYERERE QEDDEEEDAD KSHDLIDA
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