| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_48638 |
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| Symbol | AGE1 |
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| ID | 4840391 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 791645 |
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| End bp | 794542 |
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| Gene Length | 2898 bp |
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| Protein Length | 965 aa |
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| Translation table | 12 |
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| GC content | 38% |
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| IMG OID | 640391706 |
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| Product | GTPase activating protein |
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| Protein accession | XP_001385513 |
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| Protein GI | 150866044 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5347] GTPase-activating protein that regulates ARFs (ADP-ribosylation factors), involved in ARF-mediated vesicular transport |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0963315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCTAT CTAAGCTCTC ATTCCCGTAC TTTGAGTGCA AGGATTCTCA AGTGTCACTT
CTCAAGCTCA TTCTCACAGA CGAGATCGAC TCCACGAGAT ACTCCATAGT TTTGGACAAC
GACAAAGGCG TCTCATCCAT CTCCAAGACA TTAACACAAA CGCTGCAGGT GGTTCCAGAA
CTAGTCACCT ATATCGAGAA TCCTACCAAG ACCAGCCCTA CTCCTTTACT TATACGTGTA
AATGCCGAAT TCAACAAGTT GAAGCTCAAT GTGGCTATAA GACCTTCGGC AAACTTTCTC
AACCAATCTC TCGTAATTGT TAAATCTTCT TCCAACACAG ACAGCATCGA TGAGTTGAAG
CATGTTCTTT ACGAAGATGA TCAATCCAAT TTTGACATCT CCAAAATTGA CTATTCCAAT
CTTCCCATTG ACCAGAATAA GCAAGAACCA CAACGTGTGG TCATTAACGA CATGTTTGAC
AACAAGAGAA TCAACGACAG CAAGTTGAAC GTCTCACTCT GGCAATTAGA CTCGACCACT
AACGAATATA CCCACATCCT TGGTTTCAGT GTATGGATCA ATGAGCTCGC CAAAGTTAAG
CATACATCAC TGCGGGTGAA ACTGCCTGTG CCTCAAGAAA ACAACTTGAG AGGCAAACAC
TTCAAATTAG CTGATTTCAA GAGAGAGTTC AATTTCAATA TAGAAGATGG TCCTGAGTTC
AGAAAGACAT TGGCCAAATA CGAGGCCAGC TTGCCACAAT ACAAAAGAGC AGTATCCAAT
TTGCATGAAG AGTTGAAACT GTTAGAAACT TCGTTGAAGA GACTTACTAG CACCAAGGTT
AAGCTCATTG AATTGGTCAA CTCCACAGAG TTCCAATTCA ACAACTTGAT AGACCAGTTC
GGCTTTGCCA AAGACTTTGA ACGAATCTTC CGCTCAATAT TCGACCCTTT TGAAAAGAAT
CTCAGATTCT TCTTGAAGAA CGTATGTGAC CAGAAGTTGA TAACGAAGAT TTCACAGAAC
CTATCGTATA ACTCTCTTGA AGGAAGTGGC TCGTCTTCAT CGAACTCCAA TCACCACAAT
GAGTTGTTAC AGCGCAAGAA GGTGTTTGAA AGCAACTCCA AGGAGTACTA TTCGTGGTTG
AACAAATACC TTTCTAATGA AAAGGATAGA CCGGAACTGA AGTTATTGAC GAAGAGAAAA
ACATTCGAAT TGTCTAAATT TGACTACTTG AACCATTTGA ATACGATCAC TAATAACCAA
TACTCGAACC AGTTATTGGA GAGCCTCTTC AAGTTCATCA ATATGACATT CGACGAACGT
AATCCAAAAT TGTTAGATTT TGAGAAATAC AACGATGCAA AGATGAGTCA AAATTTATTC
GGAGAAAACT ATCAGATATA CCTCAATGTA TTATTGAGAT TTAACAGTGA AAAGTACCAG
TTCCGTCAAA TGATAGAAGC TTGTCTGACC AACGAAGAAT TGACTAATCT TATTAAATTT
AACTCGTTGA ACCATACTTT ACCCCCTACA ACGCAGACTT CCTCACAATC ATCGACTTCA
ATTGCGCAAG ACAATTCAGT AACTGACAAC ATTGACGAAT TTATCATCAA TAGAGACAAC
CTTGATTTGG TGTTTACCAA TAACTCGCTA TCCTCAGGAG AAGAAGCTAT ACCTATGTCC
TCGACCAGTA CGGATGATCA AAATGCTGAA ATGTCAGGTA TATTGTATAC GTTGGGTGGA
CAGGGTAAAA CTGGTTGGCA TAAAGAATGG GTTGTTTTGA ATAGAGGTCA ATTGACTGAG
TATTCTGATT GGAGAAAAGG AAAAACACCA ATTAACAAAC CAATTGAGGT AGCCCTCTCA
AGTGTAAAGC CTATTACTTA TGAAAAGAGA CAAAACTGTT TTGAGATTTA CACTTCATTG
CGCACCAAGC ATGTATTCCA AGCCCTTAAT GAGGATGAAA GAAATAAGTG GATCAAAGCT
CTTTACAATG CTGGCCAAGT TGTGGATACA TCGAGACTAA AGGAAAATTT TGGTCATAAT
GTTGATTCTA GTAAGAGAAA GAACTTGAGT AAATTGATAA TCGACTTATC AGAAAAACCA
ATTGTTCCAA ACCAGTCTTT GGACAGATCA ATTTCACCAA TATCTATCAC TTCTAGAGCC
CCACCAGCAG AAGAAAAAGA CTACTTGAAT TTGGTAAGGT CAATTCCAAA CAGTAACAAT
AATATTTGTT TGGATTGTGG TTCTATGGAA TCAGTAGAGT GGATTTCCAT AAATTGTTTG
GCATGTTTCT GTGTAAAGTG TGCTTCTTGT CATCGTAATA TTGGTTCACA CATTACCAAG
ATCAGATCCC TCAAGTTAGA TAAATTTGAA AATGAAAGCG AGATGCTTCT TAAATACATT
AACAATTGCC AGGTCAATAG ATTCTTGGAA GAAAACCTTG ATCCTAAGGA GAAGATCACA
CCCTCAGTTT CAGACGATGC TCGTTTATCC TTCATCAGGA ATAAGTACTT ACTCAAGAAG
TACAAGTCGA TTATCCCTGA TATTACAAAT CAATTGATCA AGGCAATACA AAAGATTCAT
GTTCCCGAAG TATTGAAAAC TATAATTTGT GGGGCAGACA TCAACACCAA TATCCAAATA
AGCATTCCAA GTAAGCAAGA GTACCAAGTG ATTTCCTTGT TTGAGTACTC GTTGAGGAAG
TTTATTGAAC TCGAGGATGA CGGCTTAATT CTCACAAGTT CGAAAAAGTT GTTTGTAATT
TCCGAGCTCT TGATTCTTAA TGGATGCAAA ATTGATGACA TAAAGGACTT GAGGAAGGAC
ATAGGCTTGA CAGATGCAGC CATAGAGTAC TGGAAGATCA GAAGCTTAAA GCTTAGCGGT
GGTCTATTAA CACCATGA
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| Protein sequence | MSLSKLSFPY FECKDSQVSL LKLILTDEID STRYSIVLDN DKGVSSISKT LTQTSQVVPE
LVTYIENPTK TSPTPLLIRV NAEFNKLKLN VAIRPSANFL NQSLVIVKSS SNTDSIDELK
HVLYEDDQSN FDISKIDYSN LPIDQNKQEP QRVVINDMFD NKRINDSKLN VSLWQLDSTT
NEYTHILGFS VWINELAKVK HTSSRVKSPV PQENNLRGKH FKLADFKREF NFNIEDGPEF
RKTLAKYEAS LPQYKRAVSN LHEELKSLET SLKRLTSTKV KLIELVNSTE FQFNNLIDQF
GFAKDFERIF RSIFDPFEKN LRFFLKNVCD QKLITKISQN LSYNSLEGSG SSSSNSNHHN
ELLQRKKVFE SNSKEYYSWL NKYLSNEKDR PESKLLTKRK TFELSKFDYL NHLNTITNNQ
YSNQLLESLF KFINMTFDER NPKLLDFEKY NDAKMSQNLF GENYQIYLNV LLRFNSEKYQ
FRQMIEACST NEELTNLIKF NSLNHTLPPT TQTSSQSSTS IAQDNSVTDN IDEFIINRDN
LDLVFTNNSL SSGEEAIPMS STSTDDQNAE MSGILYTLGG QGKTGWHKEW VVLNRGQLTE
YSDWRKGKTP INKPIEVALS SVKPITYEKR QNCFEIYTSL RTKHVFQALN EDERNKWIKA
LYNAGQVVDT SRLKENFGHN VDSSKRKNLS KLIIDLSEKP IVPNQSLDRS ISPISITSRA
PPAEEKDYLN LVRSIPNSNN NICLDCGSME SVEWISINCL ACFCVKCASC HRNIGSHITK
IRSLKLDKFE NESEMLLKYI NNCQVNRFLE ENLDPKEKIT PSVSDDARLS FIRNKYLLKK
YKSIIPDITN QLIKAIQKIH VPEVLKTIIC GADINTNIQI SIPSKQEYQV ISLFEYSLRK
FIELEDDGLI LTSSKKLFVI SELLILNGCK IDDIKDLRKD IGLTDAAIEY WKIRSLKLSG
GLLTP
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