Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_48297 |
Symbol | |
ID | 4840350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | + |
Start bp | 745882 |
End bp | 746799 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 12 |
GC content | 41% |
IMG OID | 640391665 |
Product | hypothetical protein |
Protein accession | XP_001385501 |
Protein GI | 150866034 |
COG category | [S] Function unknown |
COG ID | [COG2135] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.117145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATCCGTGTAC AATTTGATGT TTCCAGAGTT CACAATTGGT ATCCTTCCTA CAATATTGCA CCTACCAATG CTGCGTTAAT GATCTATATG GTAAACACAA GTGATGCTGA CTACAGATAT GTGTTGGAAC CGCTGAAGTT TGGCATGATA CCGTATTGGG CGAAGCCGAC TGACCCCGAG CCGACCAAAA ATGGCGTTGC CTATTCCAGG GAGATCCAGA AACATCAATC TAAATACTTC AACTGTAGGA AAGAGACATT GGCACAGAGC AAGAGTGTCT GGAGTAGCAG TAGAAAGAAT AAAAGATGCG TAGTACCAAT TCAAGGCTAT TTTGAATGGT TGAAATCGAA AACAGACAAG GTCCCACATT ACGTCCACTC GAAATCGTCT TCTATTATAT ACCTAGCTGG ACTCTACTCC CACAATACGA ACTACACAGA AAACACGAAC GTCAATGGTG AATACCTTTC TTCGTTTGCA ATAGTAACCG GTGCTGCTAC GAAAACAGAC GAATATGATA TCTCGTGGTT GCATAGTCGA AAACCCATAA TGCTAGTTCC TGGTTCTCAA GAATGGTTCG ACTGGCTCGA TCCTAATAAG ACTTGGAACG AGAACTTACT AGACACAAGT TTGAATGTTG AACATAACAA GGCATATAAA GATATCGAGG GCTATCCAGT GTCGAAAGAA GTAGGTAACC CATCCAACAA GAGCGATAAC ATTATCAAAA GAGAGGAGAA GAAACCTCAA AAATCTATTA CTCTGTTCTT TAGTCCTACA AAACGAATCA AAAAAGAAGA GACACAGCTG GAAGAAAATT CCCCTGCGAA AAAGAAAATC AAAACAGAAT CTAATGATAC TAGTAGAACT AAGGTCAAGA CCGATTCTAG TGAGACTATA GTCAAGGAAG AGCAGTAG
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Protein sequence | IRVQFDVSRV HNWYPSYNIA PTNAALMIYM VNTSDADYRY VLEPSKFGMI PYWAKPTDPE PTKNGVAYSR EIQKHQSKYF NCRKETLAQS KSVWSSSRKN KRCVVPIQGY FEWLKSKTDK VPHYVHSKSS SIIYLAGLYS HNTNYTENTN VNGEYLSSFA IVTGAATKTD EYDISWLHSR KPIMLVPGSQ EWFDWLDPNK TWNENLLDTS LNVEHNKAYK DIEGYPVSKE VGNPSNKSDN IIKREEKKPQ KSITSFFSPT KRIKKEETQS EENSPAKKKI KTESNDTSRT KVKTDSSETI VKEEQ
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