| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47790 |
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| Symbol | |
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| ID | 4840410 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1292416 |
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| End bp | 1293486 |
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| Gene Length | 1071 bp |
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| Protein Length | 169 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391725 |
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| Product | predicted protein |
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| Protein accession | XP_001385944 |
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| Protein GI | 126138842 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5078] Ubiquitin-protein ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00101457 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTACAC CAGCCAAAAG AAGACTCATG CGTGATTTCA AGGTAAGTTC TACTTTTGTA
TCCCGAAAAA GGCCCGAGTC CAAAGGTAAC TTTTGCCATA ATTAATGGTC TTCTGACCAG
CGGCAACAAG GGTTTGTTGC CAGAAAGTTA CAGTGAAAAT GAAAAATAAG GCCATAATAC
TAACACCAAC TAGCGCATGC AACAGGATGC TCCCTCCGGT GTCAGTGCTT ATCCGTTACC
GGACAATGTC ATGACATGGT ATGTGATTAC AAATGAGAAA GGATAAAAAG AGAAAGGACA
TTAAAAGATT CATGAGGAGT GGGAGATATT GAGTTATGAA TAAATAAGAA ACATGACGAG
ATGAAAGTCA TATGAAGAGC AGGAGAATGA ACTTAATATG GAAAATGAAT GGATGACTAA
TGAATGAAAT TTATCCGGAA GAACAAGACA CGAATGAAAA ACTAAAGAAA TGATAGTCAT
TATCTACATG TTTATAAGGT ACGCAACATC CAAAATGATA TGATCCTAGA TTTTCGTATC
CCTGAGACGC CAATCCACAT TCACTTTCAA TACTATAAGC ATCACAGTTG AAGAGAAAAA
TATTCATCCC CCCCCCATAT CTTTTTTTGC TTTCTTCTAC TTATTCCATT ACTTTACTAA
CCTATTAGGA ATGCTGTTAT CATTGGTCCT TCAGATACAC CCTTTGAGGA TGGAACATTC
CGTCTTGTGC TCCAGTTTGA CGAGCAATAT CCCAACAAGC CTCCTACCGT CAAGTTTATA
AGTGAGATGT TCCATCCCAA CGTATATGGA TCAGGAGAGT TGTGTTTGGA TATTCTTCAA
AACAGGTGGT CTCCAACTTA CGATGTATCA TCAATCTTGA CGTCTATCCA GTCGTTGCTT
AACGACCCCA ATATCAGCTC ACCGGCTAAC GTTGAAGCTG CCAATTTGTA TAGGGACCAT
AGGTCGCAGT ACGTGAAGCG AGTGAGAGAA ACTGTAGAGA ATAGCTGGAA TGAAGATGAC
TTTGATGACG ATGACGATGA CGATGACGAT GAAGACGACG AGATCGAGTA G
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| Protein sequence | MSTPAKRRLM RDFKRMQQDA PSGVSAYPLP DNVMTWNAVI IGPSDTPFED GTFRLVLQFD
EQYPNKPPTV KFISEMFHPN VYGSGELCLD ILQNRWSPTY DVSSILTSIQ SLLNDPNISS
PANVEAANLY RDHRSQYVKR VRETVENSWN EDDFDDDDDD DDDEDDEIE
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