Gene PICST_47586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47586 
Symbol 
ID4839829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009046 
Strand
Start bp1015250 
End bp1015645 
Gene Length396 bp 
Protein Length131 aa 
Translation table12 
GC content51% 
IMG OID640391144 
Productpredicted protein 
Protein accessionXP_001385550 
Protein GI126138054 
COG category[R] General function prediction only 
COG ID[COG2118] DNA-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACT CGGAGTTAAA CGCCATCAGA GCAGCCAGAT TAGCCGAGCT TCAGAAGCAG 
ACCGGAGGCA GCTCGGACTC GGGCCAGTCT TCACCTCAAG ACGAAGCAAG AGCCTCAGCA
CTCTCGCGAG TGTTAGAGCC TAGTGCCAGA GAAAGACTAA GCAGAGTGCG CATGGTGAGA
CCAGAACGTG CGCAGCAAGT CGAGCAGTAC ATTCTCAGAT TGTTCCAGAC CGGGTCCATC
AACAGAAAAC TCTCGGAAAA GGACATTGTA GAGATCTTGG ACGGAATAAG TCGTGATTCC
AACAAGCAGG CTTCGACCAA GATCATCTAC GATCGCAAAC AGAACACCAT TGACGACGAG
GAAGAAGAAG AGGAGGAGGA TGATTTCTTT GACTAG
 
Protein sequence
MDDSELNAIR AARLAELQKQ TGGSSDSGQS SPQDEARASA LSRVLEPSAR ERLSRVRMVR 
PERAQQVEQY ILRLFQTGSI NRKLSEKDIV EILDGISRDS NKQASTKIIY DRKQNTIDDE
EEEEEEDDFF D