Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_36882 |
Symbol | |
ID | 4840278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009046 |
Strand | - |
Start bp | 1662880 |
End bp | 1663428 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640391593 |
Product | predicted protein |
Protein accession | XP_001386016 |
Protein GI | 150866420 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG5078] Ubiquitin-protein ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGGAG GCAGACACCC ATTCTATAAG AGATTACTCA AAGAGTACAA GTCCCTATCT ACCAACAGCC TTCTGGGAAT CACCATGGTG AAGAACGACG AGAACTTGAC AGAGTTTATA TTCCGTATAG AAGTGACCAA TCACACGCTT TACAAGAAAG AAGACTTGTT TCATCTCAGC ATAATCATCA CATCAGAATA TCCGGTAGAC TCTCCGCGAG TACAATTCGT AATCTTTGAT GAGATCGTCA TAGATGACGA TGATAAAGAT AGCAAGGGTT CGGAGAATAA AGATACAGTG GTCGTACCTA ATGGAGTGCC GAAAATACCA ATACATCCAC ATGTTTACTC GAATGGTCAC ATCTGTTTGA ACTTGTTGGG CGAAGACTGG ACGCCAGCAT GTCTGATTGA ATCTGTATTG TTGAGCATCC AGTCGATGCT CAACACAAAC GACAAGAACG AACGGCCACC TGATGATGCT GCTTATGTGA AGAGAGCACC TTTGAATCCC AAACTGACGA CATTTATCTA TCACGACGAT ACTGTGTAG
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Protein sequence | MAGGRHPFYK RLLKEYKSLS TNSLSGITMV KNDENLTEFI FRIEVTNHTL YKKEDLFHLS IIITSEYPVD SPRVQFVIFD EIVIDDDDKD SKGSENKDTV VVPNGVPKIP IHPHVYSNGH ICLNLLGEDW TPACSIESVL LSIQSMLNTN DKNERPPDDA AYVKRAPLNP KSTTFIYHDD TV
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