| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36839 |
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| Symbol | |
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| ID | 4840157 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1498279 |
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| End bp | 1503600 |
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| Gene Length | 5322 bp |
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| Protein Length | 1761 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640391472 |
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| Product | hypothetical protein |
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| Protein accession | XP_001385990 |
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| Protein GI | 150866404 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.13486 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0799284 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTT CAAGATTCCA GCTTATCCAT TTTGATTTAC AAGCCATTTC ACGAGTCGCC
ACAGCCGAGG CACTGGCTAC ACCTAAGGTT CACAAGAAAA GAAAGCTAAC GCTTCGCAAC
AGGGACCTTG CTATAGATAA TTTGAAGTAC CAGGATGTAA TGGAGTCTGA GCAGTTACTT
CGCAGTCAAC AGCTTGAAAA CGGGGAAGAT ACGGAAGTCG TAACTATTGT AGATCGCACT
ATGAAGTTTG AGAACCAAGA CGAGCTGCTC TTCTTACATA GCCAGTTTCT TTCCAAAATG
AACGAAGTCG CTAATGGTGT ATATGAGTAT GTTCTGGACG AGATGAAGCT TCTTTTCAGT
GGAGAGCAGC AGTTGTTGAT GGTGAAAAAC AAGAAAATCG ACAAGCTACC ACTGCGACTA
CTTCTTTCGG TCAATATAGC ACAGTCTCTA GAGAACGAAA CACTCAAGAG CGAAGTGTAT
TTGTTGAATT TATCCAATCT CACACAGTTG AAAAACAACT TGCTGAGTTC AAAACCAATT
GTAGGGTTAC TTTTCAATAC CAAAACGTAC ACAATTGAAG TCTCGATCCA TTACAAGATC
CAGCTCACAT CTAATCTATA CCGTAATTGC CAGACAGAGG TTATCAGGAA CATCCGTATG
TTGATGGCTA ATATCGCACA GCCGTGTCCG ACTGATAATG AACCTCATAA CTTGGTTCAT
AAGTATAGTA ACCGAGAAAG TGTGACCAGT GGACTATTCT ACAGATCCAT ATCTGAAAAC
ACAGAGCAAC TTCCACGTAT TGAAGAGGAT TTTGACATTC CTGAGCTCGA AACGAACCTC
ATACGTTTCC AAAAGAAAAC CGTGAACTGG ATCCTCGAAA AGGAGAATGT CAAGTTTAAC
TTCCACAGCA ATAGATGTAC TAAAGTACCA CTTATAGACG ATTCCGCAAT CGAATTGATA
ACCTCTTCAC TCAGAAATGA GCCAACCGAC AACGACAAAC TCGATACGCT TCTTTATACC
ATCATGAACA AACTCTGTTT CGGATGGAAG AGGATCTCCT TGAACAACGA GAAATACTTC
TTCAATGCCT ATACTGCCCA TTTGGCTTCG AGAAAATCCG TGTGCAAATA CTTGCATAGT
TACTACAATG ATAGCGATAA GCTCATGTGT CCAAAATACC TACCAGCACA GGCATTGCTA
TCGGAAGAAA TGGGGTTGGG AAAAACTGTA GAAATGACAG CATTGATGCT CATGAACAAG
AGGTCTATAG AAGAGGTTAA TGAACCGTTA AGAGTTCAAC TCCATACTTT TGGCGAAGTC
AAAACCATCA TAAAAGCAAA GACTACACTC GTCATTGCGC CAGATTCAAT CTTGAAACAG
TGGGTGGAAG AAATCGTTCA TCTAGCTCCA AGTCTAGCTG TAACTATTTA CCAAGGTGTG
GGGAAATATC CAAAGTTAGA CAATAATGCT GTATTAATAG CTGAGTATTT AAGAAAGTTC
GATGTGGTAT TCACGACGTA TGCTGTGATA TCAAGGGAAT TAGACTATGC ATTATACTCT
TCCAGAGGTA AAAACACAAG AAACGCTACA AAAAAAAGAA CCCAATCAGA ACACTTTGAA
GAAACATCAG CTGGAGATAT AATTCCCAGC TCTTCAACTG AAAATGACAT AGTAGTTCAA
GATGAGCAGG CGCTCTTGAG CGACTATAAG TCTTTATTTC AACTTGCAAT TACTTCCAAG
AAGCCCAAGA TTGCAAACGT TAGATCTAGT GATTCCAACG AAACCGATTA TGAAATGGCT
CTACAAGATG AGATTGCTTT GGCCATACGC CATAACCGAC TTCCCGAAAT TTATAAGAAA
GTCGACTACG AATCTCCGCT TATGTTGAGT CAGTTTTGGA GAGTTGTTTT GGATGAGGTC
CAAATGGTGT CATCGACCAT ATCAAGAGCT TTCCAGAGTG CAGCATTGAT ACCTAGATAT
CATTCTTGGG GGGTGTCTGG TACTCCAATC AAGAAGAATC TTGGAGATTT GCATTCAGTT
CTTCATTTCC TTAGATATCA GCCATTTTGT GGTGATGTAG GTAAGCTATC GTGGGACTAC
ATAACCGATG TTGTCAACAA TACTAATGAT GACTTTGTAA AGCTATGGAC TACAATTGCA
ATCAGACATA CCAAGGCAAT GACCCATGAC GATATTCAAT TACCTCCTCA GTCTCGTGTT
CTTTTGACAA TTCCTTTTAC TCCTATTGAA CAAGATTTCT ATAATGAAAA GTTGGAAGAA
TGTCTAGCTG CTATCTGTTT GGATGTCAAT GGAAATCCCA TAAGCAACGA TTGGGAACCC
TCTCCAACAA TTATGACATA TATGAGAACA TGGTTGATGA GACTAAGGCA AATTTGCTGT
AATCCCCAGA TTGGAAATCT CAATCTTGGA TCTAGAAAGT ATAAGAAGAA CTATGCTTAT
AACAGGACTT TCGGTGCTAT TCAGCAGTTG AAAACTTTGG AAAATCTCTT GGATGACATG
TTGACCAAGG CATATAATGA GATTGTAGAG ATTGAAAAAC TGATTATTCT GTTGTATCTT
GATATGGGAG AATTCTATGA ATTCATATAC AATCCCAAGG AAGCGCTTCT TTTTCTAACT
GTTGGAGTAG ATGAAACTGA AAAGATAATA CATCGTTTGA AGTTAATCCT TGAGAAGTAC
ATCAAGGACT ATAGAAGTCA GAGCAGAAAG TTGGATTTAC AGAATAGTGA CGAAAAGGAC
GAAGATATTG GAAGAATCGA CGAGCGTGGA ACTCCAGAAC TTGCTATTGT GAAAGATGAA
GTTTTAGAGA AACTTGAAGA AAAAATCAAA CTGACTAGAA TTAGGATGAG AAATTGGAAT
ATAATCTTGC ATCGGTTCTA TTTCCTTATT GCCTCGTCCT ACTTTCAGCA ATATGATAAG
GAATATATGG AGATCATGAG CAAGTCTCAG GTGTCACAGA GAGATATTCA CAGCCTTGAA
GAAGTGAAGA AAATGATGCA CTACGAAGAG GGCTCCAGAG CAGACGAATT GGCGTCTTTG
GTAAATGGCG TAGCACCAGA GGATTTTGTA TTCACCAAGA AGCCCATTAT GACTGAATAC
GTTCAAGAAG CAGATATTAA GGAATCTGAG ATTGAGGAGG CTAAGCTTAA ATTCCTAGAA
CTGAAATACT ATGATCTAGC TGAAGCTACC CGTGGAGAGA TTTTGCGTGG TTCTATTTCC
AGTGTGGAGA ATGCTGTTAA AACAAGAATA TCAACAAGAG GTCGCTACTA CGATGGCCCA
GGAGAATTTG TAGATAATGG AACCACTTTA ATACCCAGAA ACTCGAAGAA GTTCTTCATG
GTGATTCCAA TCATTGAAAC TGACTATTTT GTTGATTATT CGATTTTTTT TAAAATTAAG
TTATTTGTGG ACAAATTGAA TAGGTTGATT CTTGAATTGA ACACACAAGC CAATACGATC
AACAATTGGA TGCAGAATTT GGTGAGTATC TTATGTACTC CCTTGTTGAC CCTGGATAAG
AATCCTGTTG GTAATGAATA CGAAGAAACT ATTCAGGATC AAGATAAAGT ATCGTGTTAT
TTATTCGTTT TGTCTCAAGT GTTGACTGAT CGCTCTGAAT TTGTTAATGG TGCAGAGAAT
TCTACGAAGA TTGTCAGTAT TAAAAAGGCT CAAGAAAAGA AAGAGGCAGA CTTGGAATTA
CAGAAAATCA ATGATGAATC CTTCCTAATT GGATTAACTG AAGCTAGAGA ACAAATTAGA
CCTCGTGTTA AACTGTCATT GCAAGAGTTG GTTTTATCCA TCAAGACAAT TGAAGCGGAA
CTTAAGGACG AAGAACAGAA TGACCCTGAG AGAACGAGAA TTCAATTGGA ATTACTTGGC
AGCTTGGGAG AGCGAATTCG AACCGTGTTT GAAAACCAAA AGCTTTCCAT GATCTTATTG
CAAAAGGAAT TGAATGTCAA TTGTAATGCA GTTTTCAATT GCCGTATTGA TTATTATAAG
CAATTGCAAC AGATCTCGGA CACAGTGCAG ACGTCTGATT TCCATATGAA CAGAGAAGAA
TTGGTTATTT CCAAGATCAT GACAAAGTTG GTTTCTTATG GGCTGTTGCA CAAGCATCTC
AAGTTCAAGA TGGATAAATC AGTTGCAAAA TTCCGCTATT TGAGGGGTTT AACAGGAAGT
GACGAGGACA TTATCAATAA GGATGAAGAT GAAGCCTTGA TGTGTATCAT TTGTCGTTCT
ACAATTACTA TTGGTTCTCT CACTCAATGT GGCCACAAGT ATTGTAAAGA TTGTTTGGAG
CAGTGGTTGA GGAACAGCCA TAGTTGTCCC ATGTGTAAAT CAGTTATCAC TACGTCATCG
GTGTACAACT TCACACATCA TAAACCTGAC CTTAAGGCTA ACAAGGTTGA AGATGCGAAT
ACGGTTGATA AGAACAACAA TATCTTGTAT TCGATTTACA AGCCGATTTC AAAAGATATT
ATCGATGAAA TCCAACTGAT AAAATTGAAG CAGTCGTACA GTTCCAAGGT TAATATGATC
GTCAAGCAAC TGCTTTATAT AAGAAGCCAG AATCCAGACG CCCAGATCGT TGTGTTTAGC
CAATGGCAGG ATATGCTCTA TATTCTTGGA ACTGCTTTTA AAGCAGCAGA TATCTCATAT
TTAGGATCAT ACGGAACTTT GACTCCAGAC ATTGGAGGAG GAAGACGCAT AAAGAAGTAC
GACTCTGTGG AAACGTTCAA AGATCCTCGT AACAAGATCA CCTGCTTTTT GTTGAATGCT
AAGGCACAGG CCAGTGGATT GACTTTGATC AATGCTACTC ATATATTCTT GTGTGAGCCG
TTGGTTAATA CGTCGTTGGA ATTACAGGCG ATCTCGAGAA TACACAGAAT CGGTCAGACA
AAGCCCACCA CTGTGTGGAT GTTTGCCATC GAGAACACAG TTGAGGAAAG CATTGTCATT
ATGTCGACTG GAAAGAGGTT GGAATATATG AAGCAGCAAT CCAGCACGCC AGAGACACTT
GAAAACGATA GTGAGGAAGC AGGAGCTACT TCTGCAGTTG ATGAAGATCA GACAGCTTCT
TCATCGACTT CCGCTTCTGC TCTCATTGCA AAGTCGAAAG AAATCAACTT GAGCAAGGCA
GAGTCGATGG CGTTGATGAA CAGTGGAGGA ATTGATACCA TGATCAACAA GGGCATGGCA
CAGGGAGAGG CGGTGACCAA CTTCGATCTT TGGTCTGCTT TCTTCAGTGC ACGGACTCAG
AGTCGTCCAC TTGAACAGTT GCAGGATTCG AAGGTGACGT AG
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| Protein sequence | MDTSRFQLIH FDLQAISRVA TAEASATPKV HKKRKLTLRN RDLAIDNLKY QDVMESEQLL
RSQQLENGED TEVVTIVDRT MKFENQDESL FLHSQFLSKM NEVANGVYEY VSDEMKLLFS
GEQQLLMVKN KKIDKLPSRL LLSVNIAQSL ENETLKSEVY LLNLSNLTQL KNNLSSSKPI
VGLLFNTKTY TIEVSIHYKI QLTSNLYRNC QTEVIRNIRM LMANIAQPCP TDNEPHNLVH
KYSNRESVTS GLFYRSISEN TEQLPRIEED FDIPELETNL IRFQKKTVNW ILEKENVKFN
FHSNRCTKVP LIDDSAIELI TSSLRNEPTD NDKLDTLLYT IMNKLCFGWK RISLNNEKYF
FNAYTAHLAS RKSVCKYLHS YYNDSDKLMC PKYLPAQALL SEEMGLGKTV EMTALMLMNK
RSIEEVNEPL RVQLHTFGEV KTIIKAKTTL VIAPDSILKQ WVEEIVHLAP SLAVTIYQGV
GKYPKLDNNA VLIAEYLRKF DVVFTTYAVI SRELDYALYS SRGKNTRNAT KKRTQSEHFE
ETSAGDIIPS SSTENDIVVQ DEQALLSDYK SLFQLAITSK KPKIANVRSS DSNETDYEMA
LQDEIALAIR HNRLPEIYKK VDYESPLMLS QFWRVVLDEV QMVSSTISRA FQSAALIPRY
HSWGVSGTPI KKNLGDLHSV LHFLRYQPFC GDVGKLSWDY ITDVVNNTND DFVKLWTTIA
IRHTKAMTHD DIQLPPQSRV LLTIPFTPIE QDFYNEKLEE CLAAICLDVN GNPISNDWEP
SPTIMTYMRT WLMRLRQICC NPQIGNLNLG SRKYKKNYAY NRTFGAIQQL KTLENLLDDM
LTKAYNEIVE IEKSIISLYL DMGEFYEFIY NPKEALLFLT VGVDETEKII HRLKLILEKY
IKDYRSQSRK LDLQNSDEKD EDIGRIDERG TPELAIVKDE VLEKLEEKIK STRIRMRNWN
IILHRFYFLI ASSYFQQYDK EYMEIMSKSQ VSQRDIHSLE EVKKMMHYEE GSRADELASL
VNGVAPEDFV FTKKPIMTEY VQEADIKESE IEEAKLKFLE SKYYDLAEAT RGEILRGSIS
SVENAVKTRI STRGRYYDGP GEFVDNGTTL IPRNSKKFFM VIPIIETDYF VDYSIFFKIK
LFVDKLNRLI LELNTQANTI NNWMQNLVSI LCTPLLTSDK NPVGNEYEET IQDQDKVSCY
LFVLSQVLTD RSEFVNGAEN STKIVSIKKA QEKKEADLEL QKINDESFLI GLTEAREQIR
PRVKSSLQEL VLSIKTIEAE LKDEEQNDPE RTRIQLELLG SLGERIRTVF ENQKLSMILL
QKELNVNCNA VFNCRIDYYK QLQQISDTVQ TSDFHMNREE LVISKIMTKL VSYGSLHKHL
KFKMDKSVAK FRYLRGLTGS DEDIINKDED EALMCIICRS TITIGSLTQC GHKYCKDCLE
QWLRNSHSCP MCKSVITTSS VYNFTHHKPD LKANKVEDAN TVDKNNNILY SIYKPISKDI
IDEIQSIKLK QSYSSKVNMI VKQSLYIRSQ NPDAQIVVFS QWQDMLYILG TAFKAADISY
LGSYGTLTPD IGGGRRIKKY DSVETFKDPR NKITCFLLNA KAQASGLTLI NATHIFLCEP
LVNTSLELQA ISRIHRIGQT KPTTVWMFAI ENTVEESIVI MSTGKRLEYM KQQSSTPETL
ENDNQTASSS TSASALIAKS KEINLSKAES MALMNSGGID TMINKGMAQG EAVTNFDLWS
AFFSARTQSR PLEQLQDSKV T
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