| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_36729 |
|---|
| Symbol | SEC11 |
|---|
| ID | 4840037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | + |
|---|
| Start bp | 963262 |
|---|
| End bp | 963762 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640391352 |
|---|
| Product | Signal sequence processing protein |
|---|
| Protein accession | XP_001385544 |
|---|
| Protein GI | 126138042 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0681] Signal peptidase I |
|---|
| TIGRFAM ID | [TIGR02228] signal peptidase I, archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.501968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATCC GTCAGCAGTT GACCCAATTC TTGTCGTTGG CGTACGTGTT TACGTCAGCG
TTTGTGATCT GGAAGTCTCT TGGAATCATC ACAAATTCTC ATTCGCCAAT TGTCGTTGTG
TTGTCTGGAT CAATGGAACC AGCCTTTCAA AGGGGAGACA TCTTATTCCT CTGGAATCGG
GACCAAGAAG CAAAGGTTGG AGATATCGTA GTTTACGAAA TTCAAGGAAG AAATATCCCC
ATAGTTCACA GAGTATTGAG AGAACATCAT AATTCTGACA AACAATTATT GTTAACCAAA
GGTGATAATA ATGCTGTAGA TGACCTTGGA TTGTACGCCA AGAAACAAAA GTACTTGAAT
CAAAAGACAG ACTTGGTCGG CTCTGTTAAG GCATACTTGC CCAAATTGGG CTACGTCACA
ATCTTGATAA CTGAAAACGT CTACTTCAAG TATGGTATGT TGGGTCTCAT GTGTATCTCA
ACCCTCCTCA CCAACGAGTA G
|
|---|
| Protein sequence | MNIRQQLTQF LSLAYVFTSA FVIWKSLGII TNSHSPIVVV LSGSMEPAFQ RGDILFLWNR
DQEAKVGDIV VYEIQGRNIP IVHRVLREHH NSDKQLLLTK GDNNAVDDLG LYAKKQKYLN
QKTDLVGSVK AYLPKLGYVT ILITENVYFK YGMLGLMCIS TLLTNE
|
|---|
| |