| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33152 |
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| Symbol | |
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| ID | 4840216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | - |
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| Start bp | 1553687 |
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| End bp | 1554784 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391531 |
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| Product | predicted protein |
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| Protein accession | XP_001386000 |
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| Protein GI | 150866408 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG0430] RNA 3'-terminal phosphate cyclase |
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| TIGRFAM ID | [TIGR03400] 18S rRNA biogenesis protein RCL1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.58339 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCTCAC CAATAGCGTT CGAGGGTCAT AGAAATTTCC GTTTGCGGTT AATTCTCTCG
ACTCTTTCTG GAAAAGCCAT CAAGATTTCC AAGATCAGAT CACAAGATGT CAATCCGGGT
CTCAGAGACC ACGAAGTGTC CTTCTTAAGA TTGCTTGAAG CCGTTACCAA TGGTTCTCAC
ATAGAAATTT CCTACACTGG TACTACCATA ATATATCGTC CGGGAATCAT CATTGGTGGG
GAATTGGTGC ACAACTGCCC TGCCAATAAG CCTGTTGGAT ATTTTGTAGA ACCCATGCTT
TATTTGGCTC CCTTTTCTAA GAAGAAGTTT TCCATTATTT TCAAGGGCGT AACTGCTAGC
GAAAAGACCA ACGATGCCAC ACCCGAATCT ATCAAATGGG GCTTGATACC GATAATGGAA
AAGTTCGGAG TCAGAGAAGT ATCTTTACAT ATCCTCAAGA GAGGTTCCGC ACCTTTGGGA
GGAGGTGAAG TACACTTAAT GTGCAACTCG CTCATTCCCC AACCTCTCAC AATGCATGCC
GTAGATATTC CAAAGTTTTC TGCCATCAGA GGTGTTGCTT ACTGTACCAG AGTTTCTCCT
TCCATAGTGA ACAGAATCAT TGATTCTGCC AGAAAGGTCT TAAGACCCAC GGGTGTAGAA
GTCAACATCA CTGCAGATGT ATGGAGAGGA GAAAACTCCG GCAAGTCTCC AGGCTTTGGA
GTTACCTTAG TAGCTGAGCT GAAGAAGGGT TGGAGAATTA TAGCTGAAGG TGTAGGTGCT
GCCGCCATGC TTCCAGAAGA TTTAGGTGAA AAAGTAGCCT TCAATCTTTT GGAAGAGCTC
ACTCACAGTG CTGTAGTTGG CAGAAATCAG TTGATGTTAG CTTTGGTGTT CATGACTATC
AGCAAAGAAG ATATCGGAAG ATTGAAGGTT CACACTCAGC AAATCGACGA AAATTTTGTT
CACATAGTTC GTGATATTAA AGAAATCATG GGTACAGAAG TGTTGTTGAA ACCAACTGAT
GAACCTGGCG AAGAAAACAT ACTCACCATG TCCATTAAGG GTATTGGGTT CACCAGTGCC
TCCAAGAAGA TAGCTTAA
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| Protein sequence | MSSPIAFEGH RNFRLRLILS TLSGKAIKIS KIRSQDVNPG LRDHEVSFLR LLEAVTNGSH
IEISYTGTTI IYRPGIIIGG ELVHNCPANK PVGYFVEPML YLAPFSKKKF SIIFKGVTAS
EKTNDATPES IKWGLIPIME KFGVREVSLH ILKRGSAPLG GGEVHLMCNS LIPQPLTMHA
VDIPKFSAIR GVAYCTRVSP SIVNRIIDSA RKVLRPTGVE VNITADVWRG ENSGKSPGFG
VTLVAESKKG WRIIAEGVGA AAMLPEDLGE KVAFNLLEEL THSAVVGRNQ LMLALVFMTI
SKEDIGRLKV HTQQIDENFV HIVRDIKEIM GTEVLLKPTD EPGEENILTM SIKGIGFTSA
SKKIA
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