| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33068 |
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| Symbol | SYN3 |
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| ID | 4840247 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1357807 |
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| End bp | 1359468 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640391562 |
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| Product | Asparaginyl-tRNA synthetase, cytoplasmic (Asparagine--tRNA ligase) (AsnRS) |
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| Protein accession | XP_001385612 |
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| Protein GI | 150866122 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAAG TATATGTTAA CGAAAAAGCC GGTACGGACG ACTCAGCTGC TGGGTTCGGT
ACCGAAGAAA AGCCATTTCT CACGCCTGCC TATGCTTCCT ACTCCCTGCC AGAAGCCACC
ATCTACCTCT ACAAGCAGGT AGAAGAGTCC GAAGAGTTCG CCTATGTCGA GATTTCTGCC
TCTGCTTTAA AAAAGGCCAA GAAAGGTGCT GACGGAATCA AGAAGAAGTT GGAAAAACAG
GCCAAAGCAG CCGAAGAACA AGCTAAAAAA GCCGAGGAAC AAGCTAAGAA GCTTGCTGAA
TTGGACTTGA TCAAAATCGT TGAAGACGAA AAGTTGCCAG CTGCTAAGAA AATCAAATTG
AGAGCCATCC AAGAGAACTT GGAAACAAGA GTTGCCGTCC AAGGTTGGGT TCACCGTTTG
AGATTGCAAA AGGGTGTAGC TTTCATAACC TTAAGAGACG GTACTGGCTT CATCCAGGCT
GTCTTGTCAG GTGACTTGGC CAAAGCCCGT CAGACTCAGG AATTGACCAT TGAGTCCACT
GTAGTTATCA AGGGAGTTAT TTCCAAGTTG CCTGAGGGCA AGTCTGCACC TGGTGGTGTA
GAATTGAAGG CCGATTACTA TGAGGTTGTA GGCTTAGCTC CTTCTGGAGA CGAATCCTTT
ACCAACAAAG CTCCGGAAAA CTCCGATCCT TCATTATTGT TGGACCAGCG TCATTTAACG
TTGAGAGGTG AGACTTTATC AGCTGTAATG AAAGTCAGAG CTTCCTTGTT GAGGGCTATC
AGACGTTTTT TCGCTGAGGA AGGTTTGTTG GAAGTAACTC CTCCTTGTAT GGTTCAAACC
CAAGTAGAAG GTGGATCTAC TTTGTTCAAG ATGGACTACT ATGGCGAGGA AGCATACTTG
ACCCAGTCAT CGCAATTGTA TTTGGAAACA TGCTTGCCAG CTCTTGGTGA CGTATACTGT
GTCCAAGAAT CTTTCCGTGC CGAAAAGTCC CATACCAGAA GACATCTTTC TGAGTACACC
CATATTGAGT CTGAGCTTGC TTTCATAGAA TTTGACGACT TGTTGTCACA TTTGGAACGT
CTCATCACCA AAACAGTACA ATACGTACTT GAAGATGAAG TTGCTGGTCC TTTGATCAAG
CAGTTGAACC CAGACTTCCA ACCTCCAAAG ACGCCTTTCT TGAGAATGGA ATATATCCAT
GCTTTAGAAT GGTTGAACGA ACACGGCATT CCAAACGAAG AAGGTGAAAA GTTCAAGTTT
GGTGACGATA TCGCTGAAGC TGCTGAACGT AAGATGACTG ACACCATCGG AACACCCATC
TTGTTGATCC GTTTCCCTGT TGAAATCAAG TCGTTCTACA TGCAAAAATG CAAAGACGAT
CCAAGAGTCA CCGAGTCTGT TGATGTATTA ATGCCAAACG TCGGTGAAAT CACTGGTGGT
TCTATGAGAA CTTACGACTA CGACGAATTG ATTGCTGCTA TCAAGAGAGA AAAGTTGGAC
TTAGACTCCT ACTACTGGTT CACTGACCAG AGAAAGTACG GTACCTGTCC TCATGGTGGT
TATGGATTGG GAACTGAAAG AATTTTAGCT TGGTTGTGTG ATAGATTCAC AGTTAGAGAC
TGTTCCTTGT ATCCTAGATT CACCGGTAGA TGTAAGCCAT GA
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| Protein sequence | MSKVYVNEKA GTDDSAAGFG TEEKPFLTPA YASYSSPEAT IYLYKQVEES EEFAYVEISA
SALKKAKKGA DGIKKKLEKQ AKAAEEQAKK AEEQAKKLAE LDLIKIVEDE KLPAAKKIKL
RAIQENLETR VAVQGWVHRL RLQKGVAFIT LRDGTGFIQA VLSGDLAKAR QTQELTIEST
VVIKGVISKL PEGKSAPGGV ELKADYYEVV GLAPSGDESF TNKAPENSDP SLLLDQRHLT
LRGETLSAVM KVRASLLRAI RRFFAEEGLL EVTPPCMVQT QVEGGSTLFK MDYYGEEAYL
TQSSQLYLET CLPALGDVYC VQESFRAEKS HTRRHLSEYT HIESELAFIE FDDLLSHLER
LITKTVQYVL EDEVAGPLIK QLNPDFQPPK TPFLRMEYIH ALEWLNEHGI PNEEGEKFKF
GDDIAEAAER KMTDTIGTPI LLIRFPVEIK SFYMQKCKDD PRVTESVDVL MPNVGEITGG
SMRTYDYDEL IAAIKREKLD LDSYYWFTDQ RKYGTCPHGG YGLGTERILA WLCDRFTVRD
CSLYPRFTGR CKP
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