| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_33008 |
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| Symbol | XUT1 |
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| ID | 4839826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009046 |
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| Strand | + |
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| Start bp | 1207231 |
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| End bp | 1208931 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640391141 |
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| Product | sugar transporter, high affinity, putative |
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| Protein accession | XP_001385583 |
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| Protein GI | 126138120 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.348655 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGGTG GTGGTGACGG TAACGATATC ACAGAAATTA TTGCAGCCAG ACGTCTCCAG
ATCGCTGGTA AGTCTGGTGT GGCTGGTTTA GTCGCAAACT CAAGATCTTT CTTCATCGCA
GTCTTTGCAT CTCTTGGTGG ATTGGTCTAC GGTTACAATC AAGGTATGTT CGGTCAAATT
TCCGGTATGT ACTCATTCTC CAAAGCTATT GGTGTTGAAA AGATTCAAGA CAATCCTACT
TTGCAAGGTT TGTTGACTTC TATTCTTGAA CTTGGTGCCT GGGTTGGTGT CTTGATGAAC
GGTTACATTG CTGATAGATT GGGTCGTAAG AAGTCAGTTG TTGTCGGTGT TTTCTTCTTC
TTCATCGGTG TCATTGTACA AGCTGTTGCT CGTGGTGGTA ACTACGACTA CATCTTAGGT
GGTAGATTTG TCGTCGGTAT TGGTGTGGGT ATTCTTTCTA TGGTTGTGCC ATTGTACAAT
GCTGAAGTTT CTCCACCAGA AATTCGTGGT TCTTTGGTTG CTTTGCAACA ATTGGCTATT
ACTTTCGGTA TTATGATTTC TTACTGGATT ACCTACGGTA CCAACTACAT TGGTGGTACT
GGCTCTGGTC AAAGTAAAGC TTCTTGGTTG GTTCCTATTT GTATCCAATT GGTTCCAGCT
TTGCTCTTGG GTGTTGGTAT CTTCTTCATG CCTGAGTCTC CAAGATGGTT GATGAACGAA
GACAGAGAAG ACGAATGTTT GTCCGTTCTT TCCAACTTGC GTTCCTTGAG TAAGGAAGAT
ACTCTTGTTC AAATGGAATT CCTTGAAATG AAGGCACAAA AGTTGTTCGA AAGAGAACTT
TCTGCAAAGT ACTTCCCTCA CCTCCAAGAC GGTTCTGCCA AGAGCAACTT CTTGATTGGT
TTCAACCAAT ACAAGTCCAT GATTACTCAC TACCCAACCT TCAAGCGTGT TGCAGTTGCC
TGTTTAATTA TGACCTTCCA ACAATGGACT GGTGTTAACT TCATCTTGTA CTATGCTCCA
TTCATCTTCA GTTCTTTAGG TTTGTCTGGA AACACCATTT CTCTTTTAGC TTCTGGTGTT
GTCGGTATCG TCATGTTCCT TGCTACCATT CCAGCTGTTC TTTGGGTCGA CAGACTTGGT
AGAAAGCCAG TTTTGATTTC CGGTGCCATT ATCATGGGTA TTTGTCACTT TGTTGTGGCT
GCAATCTTAG GTCAGTTCGG TGGTAACTTT GTCAACCACT CCGGTGCTGG TTGGGTTGCT
GTTGTCTTCG TTTGGATTTT CGCTATCGGT TTCGGTTACT CTTGGGGTCC ATGTGCTTGG
GTCCTTGTTG CCGAAGTCTT CCCATTGGGT TTGCGTGCTA AGGGTGTTTC TATCGGTGCC
TCTTCTAACT GGTTGAACAA CTTCGCTGTC GCCATGTCTA CCCCAGATTT TGTTGCTAAG
GCTAAGTTCG GTGCTTACAT TTTCTTAGGT TTGATGTGTA TTTTCGGTGC CGCATACGTT
CAATTCTTCT GTCCAGAAAC TAAGGGTCGT ACCTTGGAAG AAATTGATGA ACTTTTCGGT
GACACCTCTG GTACTTCCAA GATGGAAAAG GAAATCCATG AGCAAAAGCT TAAGGAAGTT
GGTTTGCTTC AATTGCTCGG TGAAGAAAAT GCTTCTGAAT CCGAAAACAG CAAGGCTGAT
GTCTACCACG TTGAAAAATA A
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| Protein sequence | MHGGGDGNDI TEIIAARRLQ IAGKSGVAGL VANSRSFFIA VFASLGGLVY GYNQGMFGQI
SGMYSFSKAI GVEKIQDNPT LQGLLTSILE LGAWVGVLMN GYIADRLGRK KSVVVGVFFF
FIGVIVQAVA RGGNYDYILG GRFVVGIGVG ILSMVVPLYN AEVSPPEIRG SLVALQQLAI
TFGIMISYWI TYGTNYIGGT GSGQSKASWL VPICIQLVPA LLLGVGIFFM PESPRWLMNE
DREDECLSVL SNLRSLSKED TLVQMEFLEM KAQKLFEREL SAKYFPHLQD GSAKSNFLIG
FNQYKSMITH YPTFKRVAVA CLIMTFQQWT GVNFILYYAP FIFSSLGLSG NTISLLASGV
VGIVMFLATI PAVLWVDRLG RKPVLISGAI IMGICHFVVA AILGQFGGNF VNHSGAGWVA
VVFVWIFAIG FGYSWGPCAW VLVAEVFPLG LRAKGVSIGA SSNWLNNFAV AMSTPDFVAK
AKFGAYIFLG LMCIFGAAYV QFFCPETKGR TLEEIDELFG DTSGTSKMEK EIHEQKLKEV
GLLQLLGEEN ASESENSKAD VYHVEK
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