| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_32520 |
|---|
| Symbol | DUR3.2 |
|---|
| ID | 4840130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009046 |
|---|
| Strand | - |
|---|
| Start bp | 1198 |
|---|
| End bp | 3875 |
|---|
| Gene Length | 2678 bp |
|---|
| Protein Length | 658 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640391445 |
|---|
| Product | Urea active transport protein |
|---|
| Protein accession | XP_001385686 |
|---|
| Protein GI | 150866181 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0591] Na+/proline symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAT CTTTGCTCAA CGAAGGCTAT GGCTACGGCT TCGTTCTTGG CCTTGGTGCC
GCATTCGCAC TTATAATGTC AATCATCACT AAGGTGTTAT CCAAATATGG GGGCCAGGTT
CAAAATTCCG AAAGATTCTC AACTGCATCC AGAAATGTCA ACTCAGGTTT AATCGCCTCA
AGCACAGTTT CTGCTTGGAC TTGGCCAGCT ACTCTACTCT CAGCTGGAAC ATGGAGTTAT
TCTCATGGTA TCATGGGTGG ATTCATGTAT GGTATTGGGG GAACTATTCA AATTACTTTG
TTTGTCTTCT TAGCAATTCA AATTAAACTC AGAGCCCCGT CAGCACACAC TGTATCAGAA
TGTTTTTCGA TAAGATATGG TAAGGCAGGT CACTGTGTAT TTCTTTGCTA CTGCATTGCT
ACCAACATTT TGGTGTCCTC TCTTCTTCTA CTTGGAGGTT CGCAAGCTTT TTCCGCTACC
ACAGGCATGC ATGCAGTTGC TGCAAGTTTC CTTTTGCCTC TAGGAGTAAT GGTGTATACT
GCTCTTGGTG GATTGAAGGC TACATTTATG TCCGATTGGA TCCACACTGT CGTTATATAT
GTAATTTTAA TGGTTTCTTG TTTTACTATT TATTGCAGCT CAAGTCTAAT TGGCTCTCCA
TCAAGAATGT ATGATCTCTT AAGAGAGGTT CAGGAACAGT TTCCCTCAGA AACTGGTACA
AGTTATCTAT CATTCAGAGA CAAGGAAATG ATGCTTTTGA CTTGGACAGT TATGCTTGGA
GGACTTAGCT CAGTTTTTGG TGACCCTGGG TATTCTCAGC GAGCAATCGC GTCTGACGCC
AAAAGTGTGT TCCAAGGATA TATAATGGGT GGTATCTGTT GGTGGATCAT TCCTGCAGCT
CTTGGATCAT CGGCAGGTCT TGCATGCAGA GCATTATTAA CCAACCCTGC TTCGGTTACA
TATCCGAGGG CACTTTCCAC TTCCGAAGTA GACTCGGCTT TGCCAGTTAT CTACGGTTTG
ACTGCAATTT TTGGTCGGAG TGGTGCAGCC GCAGGTTTAG TTATGGTATT TATGTCAGTT
ACTTCAGCAA CTTCAGCAGA ATTAATTGCA TTTTCATCTG TCACTACCTA TGACGTTTAC
AGAACTTACA TCAATCCTTC TGCAACAGGA GTGCAGTTAG TTAGGGTTGG TCACATCGCT
GTAATTGGAT TCAGTTTATT CATGGCTGTT TTGTCTACTA TTTTCAACTA TGTCGGAGTT
ACTTCGGGTT GGCTATTGAG TTTCGTTGGT ATTGTTCTTT CTCCAGAAGT CAGTGCTGTA
TTGTTGACCT TATTCTGGAA TAAAATGACA AAGACGGCAT TGATAATAGG GGCTCCTTTG
GGCACTATTT CAGGTATCGC ATGTTGGATT GGAGCTACAT ATTCATTTGC TAATGGAGTC
GTTGATAAAA ACAGTGTAAT GATGAGCGAG GCAACCTTCG TGGGAAACAT TGTGGCTTTA
GCCTCAACTC CAATTTATAT TTTTCTCATT AGTTTCCTTT ATCCGGAAAA ATCGTTTGAT
CTAGCATCAT ATAATCGGAT TGAGCTAGGT GATGATCTTG ATGAAGAGGA AAAAATGGCA
CTTATTGTGG ATACGAGCGA CAAGAGAACA CTTAGGATAC AATCGTGGTG GTGTTTGGGT
ATCAACGTCT TCATATTATT TGGTTGTTAC ATAATAATTC CTTGTGCATT GTATGGAAGT
GGCCATGATC TAAGTAAAAA ATCATTCACA GCACTAATTG TTGTACTACT CATATGGTTG
GTGTTAGCAG CATCATATAT TATTATTTTC CCACTATGGC AAGGTAGAGA AGCAATCAGG
TTGATTATAA AGAGCATGCT TGAGCAGGAT GAATATCAAA CTGAAAGTTT GGATGGCTTA
GATGGTACGG GTGTTGTAGA GATTGTTTCC ATCAAATATG AAGCAAAGAA ATGATGATAT
CCCTTTGTAA ATGTTTTGAA AAATATATAA TTGAACCTTT TCTTTAACTA AAATTCAAAG
GTGATGAATT CTTACTTGAT TGAATGAAGG TAATCGAATG GTATTACTTT TAGGACAGGT
GCTATTTTTT GCAGCAATTA GTATTTTTAT AGTATATTTC GCATTCTTTC TAGAGAGACA
AGCAGTACTT ACTGTACAGT AATTGAGAAG AGTTATAAAA GCAAAGTAAG CGTGTAAAAT
ATTAATAACA AGGATTGAAT ATGTTAACAG TTAAAAATAC CATGGTTTAG GATTGTTTGG
ATGTGTTATC GTTGTACTAT ATTGTAGTGA TTTGAGGAAT TGGAGGGAGA GTTATGTATA
TAGAATCACA TGACTAAATC TCATGGGAAA TGGAATTATA TACCGTCCAT ATAGAGGTGA
ATGTAATATA GTGCGTGTAT TACTAAAATG AGAACTGAGA GGTATATAAG AGAGGCGAGA
TCCTCAAAAT TTGAAAATTA ATATCAAGTT TATAATTAAA CAATTTATTA TTCATTTGAA
GGAGGATATT CTTGATTTTT GGGGAATAAC ATAATGTTCA ATAGTAGGAT TCTATTATCA
ACTTAAGACC AGGTGGGCAG CTTGTCTAAG CAGTTGTCTA AACAGTTGTA CCAAAGCAGC
AAAGAATTGC AGTAGGTGAA AGCCTGACCA GAACGTAG
|
|---|
| Protein sequence | MAESLLNEGY GYGFVLGLGA AFALIMSIIT KVLSKYGGQV QNSERFSTAS RNVNSGLIAS
STVSAWTWPA TLLSAGTWSY SHGIMGGFMY GIGGTIQITL FVFLAIQIKL RAPSAHTVSE
CFSIRYGKAG HCVFLCYCIA TNILVSSLLL LGGSQAFSAT TGMHAVAASF LLPLGVMVYT
ALGGLKATFM SDWIHTVVIY VILMVSCFTI YCSSSLIGSP SRMYDLLREV QEQFPSETGT
SYLSFRDKEM MLLTWTVMLG GLSSVFGDPG YSQRAIASDA KSVFQGYIMG GICWWIIPAA
LGSSAGLACR ALLTNPASVT YPRALSTSEV DSALPVIYGL TAIFGRSGAA AGLVMVFMSV
TSATSAELIA FSSVTTYDVY RTYINPSATG VQLVRVGHIA VIGFSLFMAV LSTIFNYVGV
TSGWLLSFVG IVLSPEVSAV LLTLFWNKMT KTALIIGAPL GTISGIACWI GATYSFANGV
VDKNSVMMSE ATFVGNIVAL ASTPIYIFLI SFLYPEKSFD LASYNRIELG DDLDEEEKMA
LIVDTSDKRT LRIQSWWCLG INVFILFGCY IIIPCALYGS GHDLSKKSFT ALIVVLLIWL
VLAASYIIIF PLWQGREAIR LIIKSMLEQD EYQTESLDGL DVVPKQQRIA VGESSTRT
|
|---|
| |