| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89976 |
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| Symbol | MTN2 |
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| ID | 4839700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 879398 |
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| End bp | 880453 |
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| Gene Length | 1056 bp |
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| Protein Length | 265 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391015 |
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| Product | conserved hypothetical protein |
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| Protein accession | XP_001385178 |
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| Protein GI | 150865809 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR03328] methylthioribulose-1-phosphate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.234213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00849343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | CTCGAGATCA ACATTCAGAA TCAAACCTCT TTGAAATTAT CTCGTTGCTT GTGATATTTC
AATTCTGGTC TCTTTTTTTT CAGTCCACAA TTATTGAGTC TACAACTTTT CAGTCTGGAC
TTCAATATTC ACATTATCAT ACTCAATACT TAGTATTTCA ATTGTTACAA TTCACTACAA
TTTCTAGTCA TTACAATGTC CTCTTCGTGC TTCTGCAAAC ATTCTGAAGA AACTCCGTTG
CTGGTCTTAT CCCCAGAGCT ACAAGAACAA TTCTCAGACC CCAACCATCC GGCCAACTTG
ATCTGTGAGT TGTGCCGTCT CTTCTACGAT AACAATTGGG TCACGGGAAC AGGTGGAGGG
ATTTCCATCA GAGACGTTGA TGGAGCTAAT CCCAACTTGG TGTACATCGC ACCTTCGGGA
GTTCAAAAGG AAAGAATTCA GCCCTGGGAA ATGTTCTTGG TCGAATTGCC CGAGGAAAAG
ATTTTGAGAA CACCAAATGA TATCCCAAAG GAATTAACCA AATCCTACAA ATACAAGCCT
TCAGCCTGTA CGCCATTATT CATGAGCTGT TACACTATGA GAGATGCTGG TGCTTGTATC
CACACTCACT CTCAACATGC TGTGATGGTG ACTTTGTTCT TGGAAGGAAA GAAGGAGTTT
GAAATCAGCC ACATCGAACA GATCAAAGCT TTACCCAAGT TGGCTCTTAA CGAAAATACT
GGAAAAATTG AAAAAATCGG CTCCATGGAA TACTACGATA AGTTGGTGAT ACCCATCATT
GAAAACACTC CTCATGAAGA GGACTTGACC GACTCCCTCC AGGAAGCAAT CAAAAACTAC
CCAGGAACAT CTGCAGTCTT GGTGAGAAGA CACGGGATCT ATGTATGGGG TGAGACCGTA
TGGAAGGCCA AGGTGTATAA CGAAGCAATC GACTATCTCT TGGAGTTGGC TGTTAAGATG
CAGCAGTCTG GTATTCCAAC GGTGAAACAG TAGAGAAGTT GTATAAAGTT TACTGTAGAT
ATTAGTTTAT AGAATTTTGT CTATTGTACA ATGAAG
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| Protein sequence | MSSSCFCKHS EETPLSVLSP ELQEQFSDPN HPANLICELC RLFYDNNWVT GTGGGISIRD
VDGANPNLVY IAPSGVQKER IQPWEMFLVE LPEEKILRTP NDIPKELTKS YKYKPSACTP
LFMSCYTMRD AGACIHTHSQ HAVMVTLFLE GKKEFEISHI EQIKALPKLA LNENTGKIEK
IGSMEYYDKL VIPIIENTPH EEDLTDSLQE AIKNYPGTSA VLVRRHGIYV WGETVWKAKV
YNEAIDYLLE LAVKMQQSGI PTVKQ
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