| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89833 |
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| Symbol | SPT23 |
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| ID | 4839440 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1343474 |
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| End bp | 1348086 |
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| Gene Length | 4613 bp |
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| Protein Length | 1165 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390755 |
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| Product | SPT3 Dosage dependent suppressor of Ty-induced promoter mutations-like protein |
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| Protein accession | XP_001384947 |
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| Protein GI | 150865638 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.637911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00744791 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | AAAGACCAAC ACATTAAAAC AACAGAATAT ATTAAGCAGC AGAGCCGTAT TTATCTGTTG
TCACATATAA AGATATAGTA GGGAGTCTAA GACCACGCCA AAAGGTCTAG AACCACATTC
TTTGCCTGCT ATATATACCG ACTCCACAGC CAAAACCCTC GTCCTAAACC ACCAATCGCT
ACTTGGGTGT TGACATATCC ATATAGTGCC CGCTCTGTTC CAGAAAGCGT CCAGCCAGCT
CAACGTGTCC AGCCGTTGAA GCCAGTCCAG AAACGACGAA CCGTTTTCAC ATTCGGTCGA
TTCAACAAAT TTTGTACGGT AGACCCAAAT ACTGTGTGTG TTAATCGGCT ACACTTGCTC
GAGACTACAA GGTGATTCTC CTAATCGTTG TATAACCCGT GTGGATCTCA GCTACGAGAG
CTTTCCGTTT TCATTATCCT CATCATACCC ATATCTCCAG GATAGATACC CATAGCATTC
TTGTAGTCTT TGAATCGCGT GAAAGCAGCT CTTGAACAAG TTCTCAGCCA TACCAAGCAT
ATATCGTACA AGTCATATCG ATATCCCGTG TCATACATCG TATTCAGACG AGTCGTAGTA
TCATTCCTTG TATCATATTA CAACATATTT CACATTAGAT AACTATCGTA TCACAGATTT
CATACGCTCA GCATGACCTC CTCCTTGACA GACGAAAACA TTCTAGATCA CAACTTCTTG
GCCAATCTTC AGCACGACGA CCAGGACATC CTTGACGAGT TCTTGGACCA GCGAGTATAC
GATTCCATAG GAACAAACAC CCCCGTGTCT GGTGCCAACG TCAAATTGGA ACAGACAGAT
TTGTTGGACA GTTTCTACCA TCCAACCTCG ATTCCAGTAT CTACTGAAGT GTCTCAACAT
CCTTCCCGAA ATGTCTCTGT GTCACAGCTC AACCACGGCT TTGATCCAAG TAGTAACCTC
ATGAAATCAG ACTCTCTTCT CACGAATAAC GCTAACGATA TGAATAACAT CAACAATATC
AATAATGGCA ATACTACTGT CAATAACATG AATAACAATA ACAATCTCGA GAATTCCAAC
GAGGACTACT TATATATGGA CCAAATCAAC TATACTACTA CCACCAACAA CAGCATGTTC
ACCAATCAGG AAAACACAAA CTCCTCTAAG AACGATCACA GCCCGTCTTC TGTGTCACAT
CAACACTTTA CTTTACCGTT ACCAGCTGGT GCTAACGATT ATGATGCAAA CAAAAGAGGT
AGTGCAGCCA GTAATCATCT TAATGGTGAA TTATTAAATG GTTCTAGTCA AATCAAGAGC
ACAACGCAGC TAGCCGAATA TGAATTTCTT CGCGATGAAG TGTCCAAGTT GAAGTTTGGA
AACCATTTCA TGAACCCTTG CCCTCCTACT GTGGATGTTC CTGATGCTTC GTATCTTGAT
TTTTCACCAG AAGCCATGCT GAAGTTGCCA TATACTCTTC AGCTTTTCAA CTTGCCTCAT
TATTCACGTG TAGAAACCCA GATTAAGTTG AAGTTCTCTT TGAGTCCACC ACCTCCTCAT
ACTCTTTTGC ATATTCCCCA AGACTTGCTT TCCAAGAACA AGTTCTGCCT CAACGAGTCG
ATCAACGATT TGAGTCCCAG AATCAAGGAA AGCTTGTTAT ATTTAGATGC ATATGTGTTG
ACGTCAGACT TGAAGAGTTC GTGCAATATC TGCTCTAGAT GTATCAAGAG GGAGCAGAAG
AGGGCATCGC GTAGAAAGGC CGGTTTCAAT CTGGACATGG GTGAAAACGT CGAAGTTTCT
ACCACGTACA ACAGCCCTGT TTCGTTAACA ACAGCTGCTG GAGTTGTGAA AAACAACCCC
AACTCGTGGG CTGACGACAA GATGATGAAG AAGGCTGTCA TTTTCAACTG TAAAGAGATA
GTTTCGTTTC CACCTCCAAC GGGTTTGATG AATGATTTGG ACAAATCGTT GGAGCTTTCG
GCCAGAATCA TCTGTTACTG TAGACACCAC AAGGAATCAG AAGGATTCAA GCTCTTGTTT
GTAGTGAAGA ACCAAGAGGG TGTTGTTGTT GCCAAGCATC TTTCTACTCC GATAATGATA
ATGGACAGAA AGAAAAACAC GGCTTCCTCT CTGATCAGAA ATGACGGCTC AGTTCCCAAC
TCTGTAGCTA ACTCTTCGAC AAACTTACAG GCTTTGAACG ATTCTTATGA ATCCAGACCT
CAGTTCAAGA AGAAGAAGAG TCACTCAGAC AGCGATGGAG AACAGAAGAG TTCAATAAAT
TCTCTTCATC CATTGTCACC TAACTCTATA GACGAGTCCG CCTCTGAGCC TCAGACTAAT
ACCGATACTA ATACGGAAGG TAGAGGGTTG AAGCGTAAGA AGTTATCTAT AGACGATTCT
TTCAACAGCT CCACAAATCC AATGTTCAAC GGTAGTGTGA ATGGATTCTC TCCTTTGAGC
AACAGTGACA CGAATACCTC TACAACGAAT CATAACTTGA TGGTGAAAAC GCAGACTCCT
TCAATTACTA ATGGATTTGG TCTATCTCCT TTAACTCAAG CACAGAACCA GCTGCAGTCA
TCTCAACAGA ATTTGCCTTC TATCCAGAGA ATCATTCCTG CCCAGGGTCC TATTCGTGGA
GGTATTGAAG TGACTTTATT AGGTTTCAAT TTCCGCCCAG GTTTACAAGT GAAGTTTGGA
GCCAACCAGG CTTTGGCTAC ACATTGCTGG TCCGAAACTA CAATTGTTAC TTATCTCCCT
CCAGCAGCAC AGCCTGGACA AGTCTTGGTC AGTTTTGAAG ATCAGGAGAG TATGATGTTG
GGAGGTCCTC AACATCAGCA GATATTTACG TACACCGACG ACACTGACAG ACAGTTGATT
GAGTTGGCAT TACAGATAGT TGGGTTGAAG ATGAATGGTA AGTTGGAAGA CGCCAAGAAC
ATCGCTAAGA GAATTGTGGG AACCGACAAC AACGCCAGTA ACTACAGCAC CAACGCTGCA
AACTCACCTA CTGGAACGAC GCAAAACATG AACCGTGCTA ACATTGAATG GTTTGACAGT
GCCCATAAGG CTGTTCAGCA ATTAACGAAG TCCGATTTGT CCACAGAGCA GATCTTAATC
AGTTTCCTTT CTTTAGTAGA TTTGCCCAAC TGTCCTATTA TTATTCCCAA CTGGCAATTG
AGCAATAAAC AAGGACAGTC GTTGTTGCAT TTGGCTACGT TGAAGAAGTA CACCCATTTG
ATCAAGTTCT TGATTACGCA TGGATGCAAG ATTGACTTGC AAGACAACCA GGGTATTACA
CCTCTCTTCT TAGCCTCGAT GTGTGGCCAC AGAGACTTGA TTAACATCTT TGTGGACTGT
AAATCGAACT GGAACTTGAA GTTGTCCAAC GACAAATTCT TGAAAGACTA CTGTGACTTG
AACGTATTGG ATATCTTCAA CAACTTGGAA GCTGAGCATA GCGACGAGTT TGACAATCTT
GAAGAAGTCA AAGACGACGA CAAATTAAAC AAGTCTATCA GTTTGGATTC ATTGAACTCT
ATGTTCACCA TGAACTATGG GCGCCATGTT TCGAAAATGG TATTGCAGGA TGAGCCTGAA
GCTAGTTCAA GTATAGTTCG TGAAAACGAT ATCTACTCTG TTGGAAAGGA GTTGCTCTCT
CCACCACATT CACCACCTAT TGAAGATACT AATTCTGAGT TTGCAGATTC TGAATTTGAA
TCAAATGACG ACGAAGACGA TTACAACGAT GTTGAATATG AAGATGATTA CTACGACGAT
GAAGAGGAAG ACGAAGAAGA GACTCGCTCT AATTACAGTT CTGACAACGA CGGAGACATA
GATGATAACG AGTCGTTGAC ATCTAACTCT ACAATTGTTC CTGGGTCGAG CGATGATACT
ACAGTTACGT CTACTCCTCC CGGGTTGTGG CAGAAGGTCA AAAATGTCTT TAATAATGAC
GAAGAAGAAA ACTTGCCATC ATACGATGAC TTATTCCCAT TTGGCCCTTC ATCTTTCAGC
TCAAAGCCTA AGACTCAGAT TGAAAGAAGT CTCAATGGTA CAACTTCCAG TGCAGTAGGA
TCTTCTAGCA AGGTTAGTGG TGTAGATTCT GATCAGCAGG ATGATGCTGG TATCTCTTCT
GATTCTTCCG AAGATATTGT GATTTCGTAT ATCAATCATC CTCGTAAGAC AGTTGAAAAT
GATAAGATGT TGTTATTCTT CTGGTTCCCC GTTTTGGTAG GCATTGTTGG GTTGTTCTTC
ATGATCAGCG TAATGGGCTA CAGATTCGAA ACCATCGAGA ACATCAAGTT GATTATCAGA
ACAACTGTAG GCCAATGGAT GGTAGGAAAC GAAAGAATCG GCAGAGTTTT CAGAAACAAT
GGAGAAAGCG TAGTCCAAGC CACTGGGCGA CTCCTCAATG TCTAATTAGA GAAACGAAGA
TGATGAATCT GTAGTGATTG GGATATTTGA TTTTGTTATC TATTGCAATT TCTATGTTAT
TGGGATATAA CCGGTTTTGT TTTTGATTGA TAATTTTTGT TTATTTCTGA GTGCTTGCAT
TCGCCTAATT AATTATTTAG CTTTACATTT AGAATACTAT AGTTCAATTT TGG
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| Protein sequence | MTSSLTDENI LDHNFLANLQ HDDQDILDEF LDQRVYDSIG TNTPVSGANV KLEQTDLLDN
SLLTNNANDM NNINNINNGN TTVNNMNNNN NLENSNEDYL YMDQINYTTT TNNSMFTNQE
NTNSSKNDHS PTTQLAEYEF LRDEVSKLKF GNHFMNPCPP TVDVPDASYL DFSPEAMSKL
PYTLQLFNLP HYSRVETQIK LKFSLSPPPP HTLLHIPQDL LSKNKFCLNE SINDLSPRIK
ESLLYLDAYV LTSDLKSSCN ICSRCIKREQ KRASRRKAGF NSDMGENVEV STTYNSPVSL
TTAAGVVKNN PNSWADDKMM KKAVIFNCKE IVSFPPPTGL MNDLDKSLEL SARIICYCRH
HKESEGFKLL FVVKNQEGVV VAKHLSTPIM IMDRKKNTAS SSIRNDGSVP NSVANSSTNL
QALNDSYESR PQFKKKKSHS DSDGEQKSSI NSLHPLSPNS IDESASEPQT NTDTNTEGRG
LKRKKLSIDD SFNSSTNPMF NGSVNGFSPL SNSDTNTSTT NHNLMVKTQT PSITNGFGLS
PLTQAQNQSQ SSQQNLPSIQ RIIPAQGPIR GGIEVTLLGF NFRPGLQVKF GANQALATHC
WSETTIVTYL PPAAQPGQVL VSFEDQESMM LGGPQHQQIF TYTDDTDRQL IELALQIVGL
KMNGKLEDAK NIAKRIVGTD NNASNYSTNA ANSPTGTTQN MNRANIEWFD SAHKAVQQLT
KSDLSTEQIL ISFLSLVDLP NCPIIIPNWQ LSNKQGQSLL HLATLKKYTH LIKFLITHGC
KIDLQDNQGI TPLFLASMCG HRDLINIFVD CKSNWNLKLS NDKFLKDYCD LNVLDIFNNL
EAEHSDEFDN LEEVKDDDKL NKSISLDSLN SMFTMNYGRH VSKMVLQDEP EASSSIVREN
DIYSVGKELL SPPHSPPIED TNSEFADSEF ESNDDEDDYN DVEYEDDYYD DEEEDEEETR
SNYSSDNDGD IDDNESLTSN STIVPGSSDD TTVTSTPPGL WQKVKNVFNN DEEENLPSYD
DLFPFGPSSF SSKPKTQIER SLNGTTSSAV GSSSKVSGVD SDQQDDAGIS SDSSEDIVIS
YINHPRKTVE NDKMLLFFWF PVLVGIVGLF FMISVMGYRF ETIENIKLII RTTVGQWMVG
NERIGRVFRN NGESVVQATG RLLNV
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