| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89662 |
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| Symbol | PRE4 |
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| ID | 4839356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 571744 |
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| End bp | 572671 |
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| Gene Length | 928 bp |
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| Protein Length | 281 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390671 |
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| Product | B-type subunit of proteasome |
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| Protein accession | XP_001384774 |
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| Protein GI | 126136501 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0638] 20S proteasome, alpha and beta subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.596472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCACG ATCCATTCCA ATGGGGAAGA CCCAGCAACG AAACATACGG TGCCTACAAC
CATCATATTG CCAATGCATC TGTTCGTGAG ACTGATCACC AGAGCTTGGA CAACTTTCCA
AAGATGAACA CACAACAGCC TATCATCACT GGTACGTCTG TGATCTCCGT CAAGTTCAAG
GATGGGGTCA TATTGGCTGC TGACAACTTG GGCTCATATG GATCCTTGTT GAGATTCAAC
AATATCGAAA GATTGATAAA AGTTGGCCAG GAAACAGTTG TTGGCATTTC TGGTGACATC
TCGGACTTGC AACAGATCGA GAGAATATTG GACGAGTTGG AAACAACGGA AGAAGTTTAC
GACAGCGATG GGGGCCACAA CTTGAGAGCT CCTCACGTAC ACGAGTACTT ATCGAGAGTA
TTATACAACA GGAGATCCAA AATGAATCCC TTGTGGAATG CCATTATTGT GGGAGGCTTC
AACGATGACA GAACTCCTTT CTTGAAATAT ATTGACTTGT TAGGAGTTAC CTACGGCGCT
TCAACGTTGG CTACAGGATT CGGTTCTCAT TTGGCGGTGC CTTTGTTGAG ACAATTGATT
CCGAATGATG TAGACTATGT AAACGTGTCG GAAGAACAAG CAAGAAAAGT GGTAGAAGAC
TGTATGAGAG TGTTGTTCTA CCGTGACGCC AGGGCCTCTG ACAAGTTCTC GTTGGTGACA
ATTAAGAGGT CTGCTGAAGA GCCAGATACA TCTTACACAT TCAACTTCGA GAAGGAGTTG
AAGGTAGAGA ACCAGAGCTG GAGATTCGCA AAGGACATCA GAGGTTACGG CAGTCAACAG
CAGTAGAGAC CATAGAAGTA GGTACCACTA AATATGTCAT CTGTATTACC CATATAGTGT
CAGTTATCAA TCAATAATGA TTATCATC
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| Protein sequence | MNHDPFQWGR PSNETYGAYN HHIANASVRE TDHQSLDNFP KMNTQQPIIT GTSVISVKFK
DGVILAADNL GSYGSLLRFN NIERLIKVGQ ETVVGISGDI SDLQQIERIL DELETTEEVY
DSDGGHNLRA PHVHEYLSRV LYNRRSKMNP LWNAIIVGGF NDDRTPFLKY IDLLGVTYGA
STLATGFGSH LAVPLLRQLI PNDVDYVNVS EEQARKVVED CMRVLFYRDA RASDKFSLVT
IKRSAEEPDT SYTFNFEKEL KVENQSWRFA KDIRGYGSQQ Q
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