| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89595 |
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| Symbol | |
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| ID | 4839361 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 586873 |
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| End bp | 588840 |
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| Gene Length | 1968 bp |
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| Protein Length | 503 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390676 |
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| Product | predicted protein |
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| Protein accession | XP_001385121 |
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| Protein GI | 150865774 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.136395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTTTTTCAAA TCAAATTCAC AATTCAGTTC ACGGAATATC TATTCCATTA TTTCTCAATT
CTGTACATAC ATGTACCATG AACGCGTCCA CCATAACCGT CCATTGGCAC AACGACAATC
AGCCCATTTA CTCTGTGGAC TTCCAGCCCT CGGCATCTGG CCCTTCTCCT AGATTGGTCA
CAGGAGGAGG AGACAACAAT ATCCGAGTCT GGAAATTGCA CCATAAACAT GACCAAGTAA
ACCTAAATCA ACATGACCAA GGGGGCCAAT CTCAACAAAG TCAACAATAT CAAAATCAAA
ACCTACAAAA TACAAGCGTA GAGTATCTCA GCACATTGAG AAAACATACA CAGGCTGTCA
ATGTCGTCAG ATTTAATCCC TTGGGTACTA TATTGGCAAC AGCTGGTGAC GATGGAACGT
TGATTCTTTG GAAACTCGCT GACCGGGTCT TGAAGGATTT TGAAGCGGAG GATGAAGACG
ATGATGATGT TCAGGAGTCG TGGCAGGCTG TGTGTCAGTT CCGATCGTCG ACTTCTGAAA
TCAATGATAT ATGCTGGTCG TCAAATTCCC GGTATTTGGT CACTGGTTCC ATGGATAACA
TCACTAGAGT GTATCATATC GATTATGCCA ATGATAAGGT CACTGGTACT CTTGTGACAT
CGAGCAAGAA CCATAACCAC TACATCCAGG GTGTCTACTG GGACCCACTT GACCAGTACA
TAGTAACACA ATCAGCAGAC AGATCCGTCT GCGTATACAG AATCGTTAAG CATAAGAAGA
AGGACGAGAT TGAAGACATA AAACTAGCAC ACAGATTCTT AAAATTTAAT AACCAGCACC
TTTACCACTC AGAAACATTG CAATCTTTCT TCAGAAGGTT GTGCTTTTCA CCAGATGGAA
GTTTGGTAAT AACACCAGCA GGTTTGGAAA GTGATCCTAA CACTCAAAAC GACGAAACGA
CATCAACAAC TGAAAATCTC GAGTATGATT CTTCTAATAA TACCAACATT GACATCAATA
ATATCAAAAA CAATAATAAC TCCAATAACA AGACAGACGA TTCGACCGCT ATCAACACTG
TCTATGTGTA TTCCAGATAC AGTCTCTTGC ATACGCCCAT CTACAAGATA TCGAACTTGA
ACAAGCCAGC TATTGCCGTG GCATTCAACC CATTTCTATA CGAGCCTAGT GCAACCAGTC
CAGTTCTAAA GTTAGCCTAC AAGATGATAT TTGCCGTTGC AACCCACGAC TCGATCCTAA
TATATGATAC GGAGAATTTC AAGCCTTTGG GTTACGTTTC CAACTTACAC TACAGTTCCA
TAACTGATCT CAAATGGGAT TCCGACGGTA CAAAGATCAT CGTGAGTTCA ACTGATGGAT
TCTGTCTGAT AATATCGTTT GATGACAATG TGTTCGGCCA GCGATATGCA AAGAAGGAAG
AGAAATCAGA GGGTGTGCCT TTGACTGTTC CTGTCACTGA TCCTCCGACA CCTGTGGCAA
CAAATTCAAG AAGCTTGACT CCTATCAACA ACCTAAAAGC TCTTCATTTG TCCAGTGATG
TGGGGGAAAT AGAGGACTAC AAGTCGGATT TCGACTCATC GGAGGCAAAG GACGTAGAAA
TGATACTGGG AGACACCAGT CCTGAAGTTG AAATAGTAGA GATAATATCC GAAGAAGAAA
CTACGGATGT AGCTGCTCCT TCCATGGGAA CTATAGATAA GTTTTTCATG AGGCTGAAAG
AGCTCTCGCC CAACAAGGAC AAGAACAAGC GTAGAGTTGT GCCTACATTG GTAAATAACT
AGAAAGTGCT ATTTGTTATC TGTTAACATT AGTTAGCTAG TTAACGATAG ATAATAAGAA
TACTAAGTTA ACAATACGTT AACCATGGGG TACTTAGTTA GAATTAGATA CCAGTTAGCA
ACATTGAAAT ATGACGAGCG AGAACGGTCC TTCTCGTGAG GTGAATCT
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| Protein sequence | MNASTITVHW HNDNQPIYSV DFQPSASGPS PRLVTGGGDN NIRVWKLHHK HDQYLSTLRK
HTQAVNVVRF NPLGTILATA GDDGTLILWK LADRVLKDFE AEDEDDDDVQ ESWQAVCQFR
SSTSEINDIC WSSNSRYLVT GSMDNITRVY HIDYANDKVT GTLVTSSKNH NHYIQGVYWD
PLDQYIVTQS ADRSVCVYRI VKHKKKDEIE DIKLAHRFLK FNNQHLYHSE TLQSFFRRLC
FSPDGSLVIT PAGLENDSTA INTVYVYSRY SLLHTPIYKI SNLNKPAIAV AFNPFLYEPS
ATSPVLKLAY KMIFAVATHD SILIYDTENF KPLGYVSNLH YSSITDLKWD SDGTKIIVSS
TDGFCSIISF DDNVFGQRYA KKEEKSEGVP LTVPVTDPPT PVATNSRSLT PINNLKALHL
SSDVGEIEDY KSDFDSSEAK DVEMISGDTS PEVEIVEIIS EEETTDVAAP SMGTIDKFFM
RSKELSPNKD KNKRRVVPTL VNN
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