| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_89481 |
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| Symbol | OCT1 |
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| ID | 4839065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 117766 |
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| End bp | 120315 |
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| Gene Length | 2550 bp |
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| Protein Length | 812 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390380 |
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| Product | mitochondrial intermediate peptidase involved in protein import |
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| Protein accession | XP_001384676 |
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| Protein GI | 150865453 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.493678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAGGTATAGA GACAGCAGTG TTCACGATGC GTCTTCTGCG CCAGCTTCTT CGAAGTACAC
CATTTCTCAC GCGGGCAAAG CCCGTGTCTG GTAAGGTGTC ACATTTCAGA CTGCGCACCG
ATCTCAAGGG AGGCTCATCC AACTCCTCTA AGTCGCCAGA TTCTGTTGGT GATGGTGCTT
CGGCACATCT TCGTCACATT TTCGACGACC AGAAGTACTT CAACAGCTTC ACCAAGTCTG
CAGCAGAAAC TTCGGGCAAG GTTTCGCTGC TTCCAGCCAT CTTCTCCTTC CGCAGGTCTG
GATTGTTCTG CAACGATAAT CTTCTGACTC CCCATGGATT GATAGACTTC TCGAAAAACT
CCCTAAGAGA AGCTAAGTCG CTTGTAGAAT CAATGCTCCA CGATGTGAAG TCTGATCCAG
CCGGCCGTTT GTCGTATATC AACAAGTTGG ATCAGTTGTC GGACATCTTG TGTAGAGTAA
TAGATGTAGC TGAGTTCATC AGAGTAGCCC ACCCATCCCA AAAATGGGTC AATGCTGCGC
AGCAAACCCA CGAAATCATG TTCGAATACA TGAACCAGTT GAATACAAAC GTAGAGTTGT
ACCAGAATCT CCGGGACATT TTGAGCGATT CCTCTGTGAC GGCCCAACTA ACAGAAGAAG
AAATTCAGGT TGGTGAGTAC TTGAAACAGG ACTTTGAAAG ATCGGGAATC CACATGAACC
CTTCTGCAAG GAATAACTTT GTAGCCATCA CCCAGGAGAT CTCTTTACTT GGATCACGTT
TTAACAACGA AATCCACAAC TTGAAGTCAT ACTGGTGTGA AATCCCTAGA TACGAGTTTG
AACAACTCGA GGACTCAAAC TTGAAAAAGG AGATTCTCGG CTACCAGTCC AAGGCCCCTC
CTTCCAAGCA TTCTTCCCAA ACTATCAGCA TCCCATTAGT GGGCCACATT CCCTTCACGA
TCCTTACCAC ATGTTCGATA GAGCTGATCA GAAGGGAGAT CTGGATTTCT TTGCATAATT
CTTCAGATGA GCAGATCGCT ACTCTTAACA ACTTCCTCAA ATACAGAGCT ACGTTGGCAA
AAATGTTGGG CTACAAGTCT TTTTCACACT ATCAATTGGA ACATAAAATG GCCAAGAATC
CCGAAAATGT AGTTACATTT TTGACTAACT TACAGAAGTC GTTGAGAGAA AAGGGTGTTA
CTGAAGAAAT CAAAAAGTTG TACCAATACA GAGATGATTC CACGATTTCA CAGGTACAGA
AGGCATCTAC TGAAGATATT ATTGATGGAG TTAAACCCTG GGATAGGGAT TACCTCTTGG
AAAAGCTCCA GAAAGCGTCT AACAAGAATT TGGAAGAGTT AGAAAACATC AACGAATACT
TGTCTGTTGG CACTATTGTC GCGGGATTGA GTGAATTATT TAAGCTGATC TACAATGTTG
AGTTTGTGCC TGTGGCAACG CTCAAGGGAG AAACGTGGGA TCAAAACCAA GTTCGTAAAG
TTGCGGTAGT TGACGATTCT ACAAAGAAGA AACTAGGGTT CCTCTATTTA GATTTCTGGT
CCCCCAAAGT CTTACCATCT CATTTCACGA TAGTTTGTCT GAGAAAGCTC AATTTAGATA
TTAAGAGCGA AACGAAAGAC AAGATGAGAC AATTGGTACA ATTGGATGAG GACGAAACGT
CACAACTCCC CGTGATTTCG TTGATTTGTA ACTTTCAGAA ATCAAATGAT GGTCACATAG
GTAGATTTGC AGGCGTAGAG AACGAGAAGC CTACATTACT TTCGTTGAAC CAAGTGGATA
CAGTTTTCCA TGAAATGGGT CATGCCATGC ATTCCATGAT TGGACGTACT GACTTGCATA
ACCTCTCTGG AACGAGGTGT GCCACTGACT TCGTAGAGTT GCCCTCGGTT CTAATGGAAT
CTTTCAGTAA GGACCCTCGA GTCTTGTGTA AAATTGCAAA GCACTACGAA ACGGGCGAGC
CATTATCTCC TAAACTATTG GCTCAGCACC AGACACAGAA AGTGATGTTA GACGAATGTG
AAACCTACAT GCAATCAAAG ATGGCCATGT TGGATCAAGT TCTACACAGC GAAGATGTCG
TCAGGACTAT TTCGGAAGAC TTTGCTAACT TCGACTCTAC GCCTATATAC CATAGTCTTG
AGTCCAAGTT GAAGGTTTTT GCCGATACCT GGTCTACTTG GCATGGTAAG TTTCCCCACT
TGTTCTCGTA TGGTGCCGTT TATTACTCCT ACTTGTTGGA TCGGGCCATC GCAGAGAAGA
TTTGGAATGG GTTGTTTGCA CACGATCCTT GGAGTAGAGA GGCGGGAGAG AAGTACAAAA
ACAGCATATT GAAGTGGGGA GGCACCCGTG ATCCTTGGGA ATGCCTTGCA GATGCGTTGG
AGAACGACGA GCTCAGCAAA GGAGACTCGC GAGCAATGGA AATAATCGGC AAGGATTCCT
TGTGACGTCA CAACAAAAGT AATTTTGGTT TTTAATGGCA TTATGAAACT TGTACATAGA
ACTTCTACAA TAGATAAAAT TACAGTATAA
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| Protein sequence | MRLSRQLLRS TPFLTRAKPV SGKVSHFRSR TDLKGGSSNS SKSPDSVGDG ASAHLRHIFD
DQKYFNSFTK SAAETSGKVS SLPAIFSFRR SGLFCNDNLS TPHGLIDFSK NSLREAKSLV
ESMLHDVKSD PAGRLSYINK LDQLSDILCR VIDVAEFIRV AHPSQKWVNA AQQTHEIMFE
YMNQLNTNVE LYQNLRDILS DSSVTAQLTE EEIQVGEYLK QDFERSGIHM NPSARNNFVA
ITQEISLLGS RFNNEIHNLK SYWCEIPRYE FEQLEDSNLK KEILGYQSKA PPSKHSSQTI
SIPLVGHIPF TILTTCSIES IRREIWISLH NSSDEQIATL NNFLKYRATL AKMLGYKSFS
HYQLEHKMAK NPENVVTFLT NLQKSLREKG VTEEIKKLYQ YRDDSTISQV QKASTEDIID
GVKPWDRDYL LEKLQKASNK NLEELENINE YLSVGTIVAG LSELFKSIYN VEFVPVATLK
GETWDQNQVR KVAVVDDSTK KKLGFLYLDF WSPKVLPSHF TIVCSRKLNL DIKSETKDKM
RQLVQLDEDE TSQLPVISLI CNFQKSNDGH IGRFAGVENE KPTLLSLNQV DTVFHEMGHA
MHSMIGRTDL HNLSGTRCAT DFVELPSVLM ESFSKDPRVL CKIAKHYETG EPLSPKLLAQ
HQTQKVMLDE CETYMQSKMA MLDQVLHSED VVRTISEDFA NFDSTPIYHS LESKLKVFAD
TWSTWHGKFP HLFSYGAVYY SYLLDRAIAE KIWNGLFAHD PWSREAGEKY KNSILKWGGT
RDPWECLADA LENDELSKGD SRAMEIIGKD SL
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