| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_84007 |
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| Symbol | |
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| ID | 4839636 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 361313 |
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| End bp | 362849 |
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| Gene Length | 1537 bp |
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| Protein Length | 439 aa |
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| Translation table | 12 |
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| GC content | 49% |
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| IMG OID | 640390951 |
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| Product | predicted protein |
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| Protein accession | XP_001384729 |
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| Protein GI | 150865491 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0724] RNA-binding proteins (RRM domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTTTCATACA CGTAGACTAG TTTGAATCGC TGGACATAAA GTCTTTCTGA TTCATATATT
TTTCAGTTTC CTATTTAGAT ACTGAATTTT TCAGATTTTT CACTTAGTAC AGAGAAAACC
AACCGATTGC ACCATGGCTC CACCTAAGAA AACTGTGAAG ATGGACTTGG GCTCCTTCTT
GGCCGATGAC TCGCTCGGCG GAGGTTCCTG GGCCGACGAG GAAGTAGACA TGTCTTCCAT
TGCTGTTGCT TCTGCCAACG CTGCTCCAGC ACGTGAGCTG TTTGGCTCGA GCTCTGGATT
TGGCAGAGAT TCCGGCTTCG GTAGAGAAGG AGGTTTCGGA GGTAGAGACG GCGGTTTCGG
TGGAAGAGAA GGAGGTTTCG GTGGAAGAGA GGGAGGTTTT GACGAAAGAA GAGAGAGAAA
GGAGTTCCCC ATTCCTGACC AACCACCTTA CCGTGCCAGA GTAGGCAATT TACCTTGGGA
ATTGACTGAA GATGATGTGG TCAGACATTT TGAAGACAGA ATGCAAGCCG AAGATATCAT
CTCCGAAGTG AAGTTACCTC AAGATAGAGA CACTGGTAGA TTGAAGGGAT TTGCCTTTGT
CACTTTCAAT GAGAGAGACG CTTTGGAAGA TGCTTTGCAA TTGAATTTGT CCGATTTTAA
CGGCAGAAAG ATCTTTGTCA ATGTCGCTGC TCCACAGAGA GACTTCGATG GTGAGTGGAA
GAGAGGTTCC GGAGTCGGAG GTGGAAGAAC CGGAGAAGAC GAACCGGAAT TGGACTGGGG
TTCGGCCAGA AACACCAGAG CATCTTTACC TCCTAGAGAA AGATCAGACA GAGGAGACAG
ACCCGACAGA GGAGACAGAC CAGAAAGAAC TCCCAGAAAA GAAGAACCAG ATCTCGACTG
GGGTTCGGCC AGACACTCTC AGGCTACCTT ACCTCCAAGA GAAAGATCTA ACCGTGACAG
ACCAGACAGA GCTGATAGAC CAGAAAGAGT CGAAAGACCC AAAAAGGAAG AACCAGAATT
GGACTGGGGC TCCGCCAGAA CTACCCACGC CACTTTACCA CCCAGAGAAA GATCCAATAG
AGACCGTGGT GACAGACCTG AAAGAGGCGA CAGACCTGAG AGAGGTGAAA GACCACAAAG
AAAGCAAGAG CCCGAGTTCG ACTGGGGTTC GGCCAGAAGT GGAGCTGGAG GTTTGCCTCC
AAGGGAAAAG TCGTTCAGAT CCGACCGTCC TAAGAAGCAA GAGCCATCCT TGGACTGGAA
GAGAGGTCAA GCCTTGCCTG CTAAGACCAA AGCCAGCTCC ACCGGTGGAA GCAAGCAACA
GAAGAAAGAC GATAAGAAGG AAGAACCAAA GCCTCAAAAG TCGTCCTTCA GCGTGTTGGC
TGTTGAGGGA GATTCGGACG AAGAAGAAAA GGACGAAGAA CCAGTTTCCC AGCCAACGGA
GGAAGCTTCC ACTGAAACTG GTTTGGAATC TGCCACAGCC AACTTGTCCG TTCAAGAAAC
AAAGGACAGC GAGGGCTGGG AAGTTGTTGG CAAGTAA
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| Protein sequence | MAPPKKTVKM DLGSFLADDS LGGGSWADEE VDMSSIAVAS ANAAPARESF GSSSGFGRDS
GFGREGGFGE GGFDERRERK EFPIPDQPPY RARVGNLPWE LTEDDVVRHF EDRMQAEDII
SEVKLPQDRD TGRLKGFAFV TFNERDALED ALQLNLSDFN GRKIFVNVAA PQRDFDGEWK
RGSGVGGGRT GEDEPELDWG SARNTRASLP PRERSDRGDR PDRGDRPERT PRKEEPDLDW
GSARHSQATL PPRERSNLER PKKEEPELDW GSARTTHATL PPRERSNRDR GDRPERGDRP
ERGERPQRKQ EPEFDWGSAR SGAGGLPPRE KSFRSDRPKK QEPSLDWKRG QALPAKTKAS
STGGSKQQKK DDKKEEPKPQ KSSFSVLAVE GDSDEEEKDE EPVSQPTEEA STETGLESAT
ANLSVQETKD SEGWEVVGK
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