| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83915 |
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| Symbol | ILV1 |
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| ID | 4839563 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1223005 |
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| End bp | 1224896 |
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| Gene Length | 1892 bp |
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| Protein Length | 539 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390878 |
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| Product | threonine deaminase |
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| Protein accession | XP_001385242 |
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| Protein GI | 150865857 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.370739 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0940196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TCATCGATGT TTTTCAGTAG ATCTGGAGAA GTTGAAAAAT TTCCAAGTTG GTGGTTCTGG
CAATTTGAAA CACACAACCA ACAATTGCTT CAGACATGTT GGTCAGAAAT TCGGCAAGAA
TGGCCAATTG GCTTTGGCGT GTCAAATTTG AGGGCAATCA TATAGCCAAA TATGACTTGA
GATTCGCCTC ATCTTCATCA CGTACTGATA GAAAAGAGTC CCAGCTCACG GCCAGAGAAA
AGTGGCCAGA CCTTCTCGAC GCCGATTTCA ACGAAGATGG TGATCCAGAC TACATCAAAT
TGATCTTGAC TTCACGAGTG TATGATGTTG TGGAAAGGGC AGGAACCCCT CTCACACATG
CCATCAATTT GTCCCATAAG TGCAATTCAA ACATCTACTT GAAGAGAGAG GATTTGCTTC
CTGTATTCTC TTTCAAATTG CGTGGAGCAT ATAATATGAT TTCACATTTG CATTCTAACT
CAAAGATGCC ACTTTCGGGT GTAATAGCTT GTTCTGCTGG TAACCATGCT CAAGGTGTAG
CTTACTCTGC CAACAGATTG AAAATTCCTT CCACTATAGT TATGCCTACG GCTACACCTT
CTATCAAGTA TACCAATGTT TCGAGACTTG GATCGCAAGT TGTTTTGTAT GGTGACGACT
TTGACTCGGC CAAGCAAGAA TGTGCCCGTT TGAGTTCATT GAACAACTTG ACGGATGTGC
CTCCTTTCGA CCATCCCTAT GTCATCGCTG GCCAGGGTAC CATAGCATTG GAGATCACGA
GACAGTTGCG CTTGGATAAG TTGAACGCAT TGTTTGTCCC TGTTGGTGGT GGTGGTCTTA
TTGCTGGTGT CGCTGTCTAC TTGAAGAAGA TTGCTCCCCA TGTGAAGATC ATTGGTGTAG
AAACAAACGA TGCTGATGCC TTGTACCAGT CGCTCAAGGC TAAAAAGCTG GTGGTACTTG
ACCAAGTTGG TATGTTTGCT GACGGAACTG CTGTCAAGGT CTTAGGTAAA GAAACCTGGA
GACTCTGTGA AAACTTAGTA GACGAAGTCG TTAAGGTTTC TACTGATGAG TTGTGTGCAG
CAATCAAGGA TATCTTTGAA GACACAAGAC TGATTACTGA ACCATCCGGA GCCTTGTCTG
TAGCCGGCTT GAAGAAGTAC ATTGAACAAA ATCCAGACAT TGACCACAGA AACAAGTTCT
ATGTGCCCAT CTTGAGTGGT GCCAATATGA ACTTCGACAG ATTGAGATTC GTCAGCGAGA
GAGCTGTTCT CGGTGAAGGT AAAGAAGTTT CGTTGGTGGT TACTATTCCT GAAAAGCCTG
GTGAATTCGC CAAGTTGCAA AGTATCATCA ATCCTAGAGC CATTACAGAA TTCTCGTACA
GGTGTAATGG TGCTGATGCC AACATCTTTG TTTCCTTCAA TGTTATTGAC AAAAAGAAGG
AATTAACCCC AATTATTGAA GACATGAACA ACAATGAACA TGGATACGAA GTAGTTGATA
TCTCTGACAA TGAATTAGCC AAGACCCATG GTCGTTATTT GGTCGGCGGT AAGTCCTCTG
AAGAAGTTGC CAATGAAAGA TTATACAGTT TCGAATTTCC AGAAAAGCCT GGAGCCTTAT
TCAACTTCTT ACAAGCTTTG AAGGCTGATT GGAACATTAC TTTGTTTCAT TACAGAAATC
ACGGGCACGA CATCGGCAAG GTTTTGTGTG GTTTTACGCT TCCTGAAGGA ACAGATGACG
CAGATTTCCA GTCCTTCTTG AATGAACTTG GATACAAGTT CAATGTTGAA AATGACAACG
TTGTCTATAA GAAGTTCTTG AGAAGCTGAT TAATCTCTGC ATTAATTGAA AAAGAAAATC
AAAAAAGTTG GTGGTAATAT ACATTTCAGT TT
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| Protein sequence | MFFSRSGEVE KFPNLLDADF NEDGDPDYIK LILTSRVYDV VERAGTPLTH AINLSHKCNS
NIYLKREDLL PVFSFKLRGA YNMISHLHSN SKMPLSGVIA CSAGNHAQGV AYSANRLKIP
STIVMPTATP SIKYTNVSRL GSQVVLYGDD FDSAKQECAR LSSLNNLTDV PPFDHPYVIA
GQGTIALEIT RQLRLDKLNA LFVPVGGGGL IAGVAVYLKK IAPHVKIIGV ETNDADALYQ
SLKAKKSVVL DQVGMFADGT AVKVLGKETW RLCENLVDEV VKVSTDELCA AIKDIFEDTR
SITEPSGALS VAGLKKYIEQ NPDIDHRNKF YVPILSGANM NFDRLRFVSE RAVLGEGKEV
SLVVTIPEKP GEFAKLQSII NPRAITEFSY RCNGADANIF VSFNVIDKKK ELTPIIEDMN
NNEHGYEVVD ISDNELAKTH GRYLVGGKSS EEVANERLYS FEFPEKPGAL FNFLQALKAD
WNITLFHYRN HGHDIGKVLC GFTLPEGTDD ADFQSFLNEL GYKFNVENDN VVYKKFLRS
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