| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83887 |
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| Symbol | HIR2 |
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| ID | 4839451 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 861781 |
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| End bp | 865900 |
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| Gene Length | 4120 bp |
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| Protein Length | 993 aa |
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| Translation table | 12 |
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| GC content | 40% |
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| IMG OID | 640390766 |
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| Product | Histone transcription regulator HIRA, WD repeat superfamily |
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| Protein accession | XP_001385175 |
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| Protein GI | 150865807 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.520766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACT TCCGCTTCCC GCCGCTTCTC CACGGAGGCG AAGTCCACAC CGTTGATATC
GACCCCACCA ACGAATGGCT TGCTACGGGA GGCTTGGACC ATATCATCAA CATCTGGAAA
CTTTCTGATC TCGTCAACTT AGCCAGAATA CTGCCATTAG AAAAGAACGA AGATAATGTA
ATTCAAAAAG AAAACGGCTT TGCTATCAAT GAGAACAATG CTGAGGCCAG AATTGGAATT
CCTGAAAATC CTCAGATCAC TGAGGCCAGC ATCAGACCTG TCGAAATAAT TGATCTCGAC
GAGGATGACA AAAAAGATGA ATCGAAAGAT GGATTCAAAA TTGACGAAGG CACATTGAGT
GACAGAGTTG AAATCAAAGA ATTAAAAGTT AATACTGTTG ACACCAAGAG CGATAATCTC
AATAACGAGC CTACTAAAAT TGAGAATGAT CATCAGCGGC ATTCTGTTTC TTCTGATAAC
ATACAAACTT CCCAAGATTC ATTGACTTCG AAAGTCAATA GCATTTCACC CGTATACACC
TTGAAAACCC ACAAAGCTGT AGTTTCCACG ATCAAGTTTT CTCCTAAAAA CAGTAAAGAG
CTTGTCTCGG CAGACACGAA GGGAAATATC TACTTGCACA ACCTTGAAAA GAACAGCCAA
ACCCTTCTCT ATCCTTTCAA TGAGGAACAG AAAGCCTCTG TAGTTGACTT AAGCTGGTCG
ATGGATTCTC GTCTTGTAGC CTGGAGCACC ATTGAAGGTA AAGTGAATGT CATAGACGTT
ACAAAGAATA CGTTTCAGGA ATTGACGGAA TTGACCCATT TGGAAAAACT TACCGTTCAA
AGAAGCATTG CCTTTGATCC TACTAACAAC TATTTGATCA CTTTGGGTGA CGATACATTG
GTTTACTTGT ACCAGTACAC GTATGATACT GCCTTGGACA ACTACCAGTT TCGCTTGATC
AACAAGATCT CCCGTCTCAT CAACAAAAAT CCCATAAACG TAAACTACAA GCGGATCTCG
TGGTCTCCAG AAGGTGAACT TCTTTCAGTT CCAACAGCCT CAAAAAATCA GACTTCGTTA
ATCTCGTTGA TTTCTCGTTC TAAAAACTGG CAAAACAGAA TCAGCTTGGT AGGACATGGG
CTTGCATGTG AAGTAGTACG ATTTCATCCC AAATTCTTGC GAGAAGGGAC TGATGATACC
GCTTTCTATA ATGTGATTGC TACCGGAGGC TCAGACAAGA CCTTGGCCAT ATGGAACACT
TCTAAAGATA CACCCGTAGT CGTCTTACAA GACGTCGTCG ACAAGCCAAT ACTTGATCTT
GTATGGGATA AAACAGGTAC TTCTTTGATT GTTGCTACGT TAGATGGACA TTTAGGAATA
GCTTCGATCG AAAACAACGA ATTGGGTCAC GAGATATCGC AAGACATGTT GGAAGAGCTA
AAGAAATTCG ACCAAGAATA CATAAAGCCT ATAAACCATA AATATGAACA CGATCAACTG
ACGACAAGAA GAGGTGAAAA ACACCAGATC GAGTTATTGG ATCAGAAAGA CGCTAAGAGC
ACGATACATA GCGAACAGAA TGAAGAAAAA GACCAAAACA AGGATGAACT GAGTGAGAAA
GAAGCAAACT CCAGTCCAAC TAATAGTCAG CCTGAGGCTA TAAGTAATGG ACCCATAGAA
CCATCAGTCA TACCTCCACC AAACATGACA GAACCAGACA CTTCAGCGAC GGATATCTTA
CATTCTGCCA TGAGCAGCAG GCAATCAAAA TCTACCACTA GTAAAACGAC CAAGACAGCA
AAGACTACCT CCATAGCATC GGCATCTTCA ATTACCGTGC CACCTTCAGA TTCGAAAAGC
GCCCAGAAGC AGGAAGTAAC CACGAAAAAC GGGAAACGTA GAATTCAGCC TATGCTTATT
TCGAACAACG GAACCACGAA ACCTGCCATA GCTTCATCTG AATCAAGTTT GGGTAACAAT
TCAACGGTCC AGTCGTCTTC AAAATCTCTA ATGGAATTTG ACAAGCCTTC TTATTCAGTT
GAAGAAGACT TCTATAAACA GAACAAGAGG TTGAAAGCAC AAGAAGAAGC TGGCTCCAAT
AAGAAAATTA AACGTGAACT CGAACCAGTT AAATTTATTG GATCAGTTAT CACAAATCCT
AATACTACTT TTTCAAAGGT GAGACTTTCA GTTCCCAAAG TAAGATTAAA CTTTCAGATT
CTGAGCAAAT TTGATGGTGA AGTCTTCATA ATGGATATCA AGAATGGAAC TGGAAACGAG
ACTAAACCTT CCAGAATCAC ATACTTCAAA AAAGACAAGC AGCTTTGGTG CGATTTTATT
CCGAGATACA TCCAATTGGC TGTCGAGGGG TCCAATTTTT GGGCATTGAG TACTTCCGAT
GGTCAAATTT TGACTTATTC CCATACATCA GGTAAAAGAT TGTTACCTCC ACTAGTTCTT
GGATCGCCTG TGTCTTTCCT TGAAAGTCAC AGTAAGTACC TTATGGCCGT AACATCTTTG
GGCGAATTGT TTGTTTGGGA TTTAGAAAAG AAAAAGATCG AGTTGTCTAC TTCGTTGACT
CCATTATTGG AACTCAGTAG CAAATATCAT GAAGATGGTT TGTCCAAGTC AGATAACATC
ACCCTATGCG CTGTCACATC TGCTGGAATT CCATTAGTGA CGCTATCGAA TTGCTCAGGG
TATCTCTTCA ACAAAAATTT ATGCATTTGG CAGACAATTA CAGAGTCGTG GTGGTCGTTT
GGTTCTCACT ATTGGGAAAG CAATGACGAG AACAGCAAAA AGCCTCAAAC ATCGAACTTG
TTTGGTGAAG AAGCTTCCAT TATTGAACTA TTGGAACATA AAACCAACGA AGAAATTATT
AGAAAAACGA GAACTGGACG AGGCAAGTAC TTCAACAAGA TCTCAAAAAA CATGATAATG
AAGGAAGGAT TTGAAAATCT TGAAAACACC ATTTCAATTA GCCACTTGGA AAATAGGATA
TTATGCTGTG AATTGCTAGG TGAGTTTAAG GATTTCAGAA GATTCTTCTT GACATACGTT
CAAAGAATAT GTGAATTAGG CTACAAAACG AAACTATTTG AGGTTTGTGA CGAGCTTTTA
GGGCCAGACA GCCAACAAGA AACAGATGTC AATTCCAGGT CGGCTTCAGG ATGGTCTTCT
AGCATCTGTG GAGTAGACAA GCATGAGTTA CTTAAGGAAG TCATTCTACT ATGTGCCAAA
CATAGAGATG CGCAACGTAT TCTTATTCAT TTTGGTAAGA AGATCGGCGT GGTTAATGAC
GTTTTGTAAT ATGTACGATA ACATTTAACT ATTTACAATG TATTATTACT CCAATTATAT
ACAATTTGGA CTCTATAATT TATAGGTGTT TGATTCATCC CACTCTTTGT CACCTAGCAA
ACCGCCCACT TGACCTTGTT GATTGTTAAT CAAGTCTTTA GGACCAGCAA CATAGCTTAC
GTACCCTTCT GGTCCACATA CTAACGATAA ACTTGGCGAT GTTTTTTGTT CCTTACTGGT
GGCTATAGCT TGTTGTATAG CATTTACATA TCTTGGAGCT CTTTCTTCGT TCAATTGTAC
CTTACTTTGA ATTGTTGGTT CCTCTCCCTC CAAAATCGAC ATTCTCAACT TCAAAGCTTC
TTCGGGCGTA AGGTCAGCTT CCTTCTGTTC TAATTTTAGA GGGCTAGTAT ACGCACTTTT
AGATGGCTTT GAAACGTCCT TAGCTGTTAG GATAGTCTTA TTCTCGGAAT CGTAATGGCG
AATCAATTTA ATTCTGTCTA ACTTTTCCAA AAAGAAAAGG AATCTCTCTA ATGGCTCCAA
TTCCCCAGGT TTTTGGGCTG AGTAGTGAAT GTTGACAAAT CCCCTGTACG GATTACGAGA
AAGCAAGACT TGAAGAATAG GAGCTATACC AGTTCCCGCA GCAAAAAAGT TTAAATTATC
GAAAGCTGGT AAGTCGTTGG CCTTTATAGT CTTTTGAAGC AAGTGTTCAG GTTCAATTTT
AGAAGGAAGA TCACGAAATA TTGGTCTAGT ATGGTAATTT TTAAGGGGAT GGTAAGGAAA
TCTGTACTCC ACATTAGGAC CTCTCAATTC GATTTCTTCT
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| Protein sequence | MKYFRFPPLL HGGEVHTVDI DPTNEWLATG GLDHIINIWK LSDLVNLARI SPLEKNEDNH
QTFNSISPVY TLKTHKAVVS TIKFSPKNSK ELVSADTKGN IYLHNLEKNS QTLLYPFNEE
QKASVVDLSW SMDSRLVAWS TIEGKVNVID VTKNTFQELT ELTHLEKLTV QRSIAFDPTN
NYLITLGDDT LVYLYQYTYD TALDNYQFRL INKISRLINK NPINVNYKRI SWSPEGELLS
VPTASKNQTS LISLISRSKN WQNRISLVGH GLACEVVRFH PKFLREGTDD TAFYNVIATG
GSDKTLAIWN TSKDTPVVVL QDVVDKPILD LVWDKTGTSL IVATLDGHLG IASIENNELG
HEISQDMLEE LKKFDQEYIK PINHKYEHDQ STTRRGEKHQ IELLDQKDAK STIHSEQNEE
KDQNKDESSE KEANSSPTNS QPEAISNGPI EPSVIPPPNM TEPDTSATDI LHSAMSSRQS
KSTTSKTTKT AKTTSIASAS SITVPPSDSK SAQKQEVTTK NGKRRIQPML ISNNGTTKPA
IASSESSLGN NSTVQSSSKS LMEFDKPSYS VEEDFYKQNK RLKAQEEAGS NKKIKRELEP
VKFIGSVITN PNTTFSKVRL SVPKVRLNFQ ISSKFDGEVF IMDIKNGTGN ETKPSRITYF
KKDKQLWCDF IPRYIQLAVE GSNFWALSTS DGQILTYSHT SGKRLLPPLV LGSPVSFLES
HSKYLMAVTS LGELFVWDLE KKKIELSTSL TPLLELSSKY HEDGLSKSDN ITLCAVTSAG
IPLVTLSNCS GYLFNKNLCI WQTITESWWS FGSHYWESND ENSKKPQTSN LFGEEASIIE
LLEHKTNEEI IRKTRTGRGK YFNKISKNMI MKEGFENLEN TISISHLENR ILCCELLGEF
KDFRRFFLTY VQRICELGYK TKLFEVCDEL LGPDSQQETD VNSRSASGWS SSICGVDKHE
LLKEVILLCA KHRDAQRILI HFGKKIGVVN DVL
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