| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83848 |
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| Symbol | PEX1 |
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| ID | 4839167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1634637 |
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| End bp | 1637830 |
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| Gene Length | 3194 bp |
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| Protein Length | 1053 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390482 |
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| Product | AAA ATPase, peroxisomal biogenesis |
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| Protein accession | XP_001385011 |
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| Protein GI | 150865688 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.979611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATTTAGTGAA TAACATCCAC TACTGTTGCA ATATGGAGGG CCATCGTGGA AGTATCAAGT
TTAGGCCAAT TAAGTCCAAC TTGGTCAATC TTCCGGCCAA TTTGTCCAAT TTGCTCTACA
CTGCTAATAT CCAAATTCAG GATGTCATCA TAGAAATCGT ATCCAATGCT ACAAAGAAGA
AGCTGTATGC TGGCTGGACT GGTATGCTGT CTGCTGTTGT CCAGACTGTT GAGATCGACC
CTGTTTTTGC AGGAGCTCTT GGCTTGAAGG ACGACGAGAA AATCACCCTC AACTTGAAGA
TCGGCAACTT TGAAGCAGGT AACATCAACT TGGAGCCGGT AACGAGTTCT GATTGGGAAC
TTGTAGAGCT TCATGCTCAG GCCATAGAAG ACACATTATT GCTGCAAACT AGATGTGTTT
CTGTGGGCCA GATTTTGGTC GTGTATCCTA ATCAGACGAC TTCAGCAAAG TTGGTAGTTG
TCGATATCGG TTCTAAGGAC CATGTATACG CTAAGATTTC GCCTTATTGT GAGATAGCGA
TTGCTCCAAA AGTAAGAGAA AAGAAAGAAA CCGTAAAATC GCTGAAGAAT TTGAGTAGCT
CTAAGTCGAA TGGAGCTGCA TCTCGTGAAG ACTACTCTTC TATGCCTGTA GCTCTCAAGA
GGGGAATTTC TCTTCCTCAT AACTTGTTTT CTGATACTCA AAATAGGGGC TACGAAGTGT
ATGCCAATCT CAGTGAATTT AACCCGACTG TTGTCAGCGA CTATGTTGCT ATCTCGGTTA
TTCCTGGTCC TAACGATAAG CTACTGAAAG CCGCTCCTCA GAGTACAGAC GATTCTGATA
ACCGAGTAGC TTCTTTGAGA GAGAATAAGC GCGTCATAGC TCGCCTAGTT GACTTTCCAT
CCAGTCCCGC CAATAACGTG GGACTTTCAA CCAAGTTGGC CATAGCCTTG AACATCGAGG
GCCAGATTGG AAACATCATA GCCATAAAGC CTGCTGTAAA AAATCTTCCC AAAAGACCTA
CTACTTTCAT TGTACATCCA TATATTACAC AAACGAAGAA ATCAGGAGAA ATAAGCATCA
ACACGACAGA GAAACTGGAG TTGCAAACTA GGGCAAAGCT GTTGTCAGAG TACTTGTATA
ACGAAGGAGC TATTTATAGT TCTTCTGCAA CGAACTACAC CAAGATCCCC ATAATTCCCA
AGCTATTACC CAATGGTGGG CTCTTAAAGT TCAGAAAAAA TGACGACATC AATGCCTGGA
TCAAACCATA TAACATCGAA TCCAAGAAGC CTATCAAAAT TGAACTTGGT GAAGAGTTGT
TGCGTGCTGG TAGTTTTGTC CAACAAGACC AGAAGGAAGA AGAGCTAGAA GTAATTGGCT
TAGATGGAGT CATAGACGAA ATTATCGAGT CTTTTACCAC ATCTAAGAAT ACAGGAACCT
TGGTTTATGG TAACTCTGGC AGTGGAAAAT CACTTGTGCT CAAGTTGGCG AGCAGGAAGA
TTGCGGCCGA ACATGGGTTC TATACGAAAT ACGTCTCTTG TGATTCGCTT ATGAATGAGA
GCTTCAATCT GTTATCCAAA AACCACATTT TCAAGTGGTT GCAACAATGC TCGTGGAATA
AGCCTTCGTT GTTAATCTTG GACAATGTAG ACAAGATTCT CAGTGTTGAA AGGGAACACT
TGGACGCTTC CAAGTCTAAT CAACTAACCG AATACTTGAT TTCCAACTTA GAAAAGATTC
ACAATCAGCA TAACAGTAAT TTGTCGATAT TACTTTCTGC TTCTTCAAAG GAAGCCATCA
ATAAATTATT GATGCAATGT CATCTTATAG AAAACTTCCA CCACTTGAGC CCCCCCGACA
AGGCACTCAG ATTAGATATC CTAGACAACT ACATTGTCAA CAAGCTTGGA TGTAAGATCG
ACTTTGATCT AATGGACTTG GTAACCGAAA CCGAAGGCTA CTTGCCCAAC GATCTCAAGA
TCTTGAGTGA CAGAATCTAC CATGAAGTAC TTTTTTCTTC TCAAGATCCT TCGGCAGAGT
TGACGGTGAC TAAACAGCAC ATTGAAAAGT CTATCCAAGG ATATACTCCT TCCAATTTGC
GTGGTGTCAA GTTACAGAAA TCGACTATTA GCTGGTCTGA TATTGGAGGC TTGAAAGAGG
CTAAGAACAT CTTGTTGGAG ACTCTTGAAT GGCCAACAAA GTATGCGCCA ATCTTTGCTA
ACTGTCCGTT ACGTTTACGT TCTGGTATCT TACTCTATGG CTATCCTGGT TGCGGTAAGA
CCTTACTTGC TAGTGCCATT GCTGGTCAGT GTGGGTTGAA TTTCATTTCC ATTAAAGGTC
CAGAAATCTT GAATAAGTAT ATTGGTGCTT CAGAACAGTC TGTTCGTGAG CTCTTTGAAC
GAGCACAGGC TGCAAAGCCA TGTATTTTGT TCTTTGACGA ATTCGACTCT ATTGCACCCA
AGAGAGGCCA CGATTCTACT GGTGTTACCG ATAGAGTTGT TAACCAGATG TTGACTCAGA
TGGATGGTGC TGAAGGTCTC GATGGTGTTT ACGTCTTGGC CGCGACTTCC AGACCGGACT
TGATCGATTC TGCGTTGTTA AGACCTGGTA GATTGGACAA AAGTGTCATT TGTGACATGC
CGGACTACGA CGACAGATTG GATATCTTGA AGAGTATTAC TGATAAAATG GACTTGGCTG
ACGATGTCAA TTTGGAAGAA ATCGCTGAGA AGACTTCAGG CTTTTCAGGT GCTGATATGC
AAGGTTTGGG GTACAACGCC TACTTGAAGG GTGTCCACGT TAAGTTGGCC AAGTTGGAAC
AGGAAAACAG TGAACCTATC AAGTCTTCTG ACAATCAGGA CACAATAGAG TTTTTCCAAG
TAAACTCTGA GAAGTTAAAG AATGCTAAGT TGAGACCAGC TGATCGAATC AAGCTCTTGA
ACCAGATACA GCAATTGTTC ACAAAAGAAG AACAAAATGA AGCTGCTTCT TCAAAGAAGG
CTCAGGACGA TTCAAAAGTC TATATAACTC ATGAGAATTT CAGAGAATCG TTAGTAGAAA
CAAAACCCTC GATTTCGTAT TCTGAAAAGA GAAAGCTTGA ACGAATCTAT AGTCAGTTTG
TCTCTGCTCG AGATGGCAAT ATGCCCGATG GCAGCGCCAG TAACGAAATC GGAGGACGAA
CCACTTTAAT GTGA
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| Protein sequence | MEGHRGSIKF RPIKSNLVNL PANLSNLLYT ANIQIQDVII EIVSNATKKK SYAGWTGMSS
AVVQTVEIDP VFAGALGLKD DEKITLNLKI GNFEAGNINL EPVTSSDWEL VELHAQAIED
TLLSQTRCVS VGQILVVYPN QTTSAKLVVV DIGSKDHVYA KISPYCEIAI APKVREKKET
VKSSKNLSSS KSNGAASRED YSSMPVALKR GISLPHNLFS DTQNRGYEVY ANLSEFNPTV
VSDYVAISVI PGPNDKLSKA APQSTDDSDN RVASLRENKR VIARLVDFPS SPANNVGLST
KLAIALNIEG QIGNIIAIKP AVKNLPKRPT TFIVHPYITQ TKKSGEISIN TTEKSELQTR
AKSLSEYLYN EGAIYSSSAT NYTKIPIIPK LLPNGGLLKF RKNDDINAWI KPYNIESKKP
IKIELGEELL RAGSFVQQDQ KEEELEVIGL DGVIDEIIES FTTSKNTGTL VYGNSGSGKS
LVLKLASRKI AAEHGFYTKY VSCDSLMNES FNSLSKNHIF KWLQQCSWNK PSLLILDNVD
KILSVEREHL DASKSNQLTE YLISNLEKIH NQHNSNLSIL LSASSKEAIN KLLMQCHLIE
NFHHLSPPDK ALRLDILDNY IVNKLGCKID FDLMDLVTET EGYLPNDLKI LSDRIYHEVL
FSSQDPSAEL TVTKQHIEKS IQGYTPSNLR GVKLQKSTIS WSDIGGLKEA KNILLETLEW
PTKYAPIFAN CPLRLRSGIL LYGYPGCGKT LLASAIAGQC GLNFISIKGP EILNKYIGAS
EQSVRELFER AQAAKPCILF FDEFDSIAPK RGHDSTGVTD RVVNQMLTQM DGAEGLDGVY
VLAATSRPDL IDSALLRPGR LDKSVICDMP DYDDRLDILK SITDKMDLAD DVNLEEIAEK
TSGFSGADMQ GLGYNAYLKG VHVKLAKLEQ ENSEPIKSSD NQDTIEFFQV NSEKLKNAKL
RPADRIKLLN QIQQLFTKEE QNEAASSKKA QDDSKVYITH ENFRESLVET KPSISYSEKR
KLERIYSQFV SARDGNMPDG SASNEIGGRT TLM
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