| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_83842 |
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| Symbol | PRW1 |
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| ID | 4839288 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1606961 |
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| End bp | 1608803 |
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| Gene Length | 1843 bp |
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| Protein Length | 514 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390603 |
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| Product | conerved hypothetical protein with WD repeats |
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| Protein accession | XP_001385309 |
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| Protein GI | 150865904 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TTTCGGAGTT TGAAAGGCAG AGACAGGAAA ATATCCAGCG GAACAAGGAG
CTCTTGAAGC TGTTGAATTT GGACTCTCTT TCTCAACTGA TTAAGAGAGA GCTTCCCAGA
GCCAGCGAGA CCAAAAAAAG GAAAACAACT CCAAGAACAA AAGCTGTCAA AAAAGAGGAT
GTCGAACCGT CAAGAAGATC ACGCCGGATT GCCGGAATCA AGTCGGAATT GGAAAACCCG
GAAGAGTACA ACCGTATAAG AGAAGAAGAA GAGGAAACCG AGAGAAAGAA GCGTGAACTT
GAAAAGTTGA AGAGAACTAG ATTGTTCGGA GAGTTCAGTC TTATTGATTT GGTCACAGAC
AAAAAACTGG GGAGTTTGAA ATTTGAAGAT AAAGTCATCA AATCCGATTC GACTGAACCA
GAAGTGAAGC AAGAAGAGAA AGAAGAACTA AGCGAAGACA TCAAAAACGA TAATAAAGTA
CTCCATAGAT TGCAAGCTCT TGGAGACAAG TTTTCTGCTG GAGATTTCTT TGATATAATT
CAAAAGAATC CCATCCAGTA CGACGATAAA GTATTACAGT CGACTCGGGA CGAGTTTGAT
AAGTTGAAGA TCTACGAGAA ACACAATCCT CTCGATATCA AGATCTCACA CACCAGGATC
ACAGCTATCA ATTTCCACCC TTCAACGACT GATAGAGTTG TGGCTGCTGG AGACACTAAT
GGTAATGTGG GAATCTGGGC TGTAGACTCG GGTGAGGACG ATTCCGAGCC TACCATATCG
ATTTTAAGAC CTCATGGTAA GGCTATATCT CGTATCTTGA CTCCTGTAGC TGAACAAAAT
AAGCTATATT CGGCTTCATA TGACGGTTCT GTTAGAGTGT TGGATTTGAA CAAGTTGGCG
TCGACAGAAG TGGTGTATCT TAATGATCCA TACGAAAACG ACGATTATGC CTTGGGAGTT
TCCGATATCA ACTTCTGTGC CTCAGATGCC AATCTCTTAT ACATGACAAC ATTATCCGGA
AGTTTCCATA AGCACGACAT TAGAACGCCA TTCAAACCTC TCAAAAGCAA AGATATACTT
CGTTTGCATG ATAAGAAGAT CGGTTCTTTC TCTATCAATC CTAACAACAC CTATCAAATA
GCCACAGCTT CGTTGGATAG AACCTTACGT ATATGGGACT TGAGAAACGT CTCGAAAGCC
AATGCCGAAT GGTCAGAATT TGAAAACCAA ATCTCACCGC ATTTATATGG TTCATTCTCA
TCAAGGCTCT CGGTGTCTTG TGTGGACTGG AATAGCGAAA ATCGACTCGT CTGCAATGGT
TATGATGATT ATATCAACAT CTTTGATTTA AGTGGTTCAG AAGAATTGCC CGCAGTGACA
GAATGGGAGT CAGACTTTCA GCCTAATGTA GCAAAGAAAT CCCGAAAGAG AAAGACCGAC
GAAGACGAAG AATCGCTTAT TCCGGACAAT TTGAAAGCAT TCAACAAAAT CAAACACAAC
TGTCAAACTG GTAGATGGGT GTCGATTCTT AAGTCCAAAT GGCAGGTTGC TCCAGAAGAC
GGTGTGCAGA AGTTTGTCAT TGCCAATATG AACCGAGCTT TAGATATCTA TGATCAAAAG
GGTCAGATAA TAGCCCACTT AACAGACTCT GTAGGAGCAG TTCCAGCAGT CTGTGGATTT
CATCCTACAA AGAATTGGGT TGTAGGAGGA AGCGCTAGCG GAAAGGTGTA CCTATTTGAA
TGACCTTTGA GGTTAACTTT GTTAGATGAA GGTAACCAGA CTGACAAGTC TACACAATCT
CGCAACTACA GTAGAAACAA TTAATATACA CGTTTTTTAC TTG
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| Protein sequence | MAKISEFERQ RQENIQRNKE LLKSLNLDSL SQSIKRELPR ASETKKRKTT PRTKAVKKED
VEPSRRSRRI AGIKSELENP EEYNHKKSGS LKFEDKVIKS DSTEPEVKQE EKEELSEDIK
NDNKVLHRLQ ALGDKFSAGD FFDIIQKNPI QYDDKVLQST RDEFDKLKIY EKHNPLDIKI
SHTRITAINF HPSTTDRVVA AGDTNGNVGI WAVDSGEDDS EPTISILRPH GKAISRILTP
VAEQNKLYSA SYDGSVRVLD LNKLASTEVV YLNDPYENDD YALGVSDINF CASDANLLYM
TTLSGSFHKH DIRTPFKPLK SKDILRLHDK KIGSFSINPN NTYQIATASL DRTLRIWDLR
NVSKANAEWS EFENQISPHL YGSFSSRLSV SCVDWNSENR LVCNGYDDYI NIFDLNEESL
IPDNLKAFNK IKHNCQTGRW VSILKSKWQV APEDGVQKFV IANMNRALDI YDQKGQIIAH
LTDSVGAVPA VCGFHPTKNW VVGGSASGKV YLFE
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