Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_83812 |
Symbol | RPP0 |
ID | 4839281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | + |
Start bp | 1569541 |
End bp | 1570578 |
Gene Length | 1038 bp |
Protein Length | 312 aa |
Translation table | 12 |
GC content | 46% |
IMG OID | 640390596 |
Product | ribosomal protein P0 (A0) (L10E) |
Protein accession | XP_001384996 |
Protein GI | 126136945 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.734538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CCATTAAATA TTCCTATCGT CAAATATAAT ACAAGTCGAA ATGGGTGGTA CTCGTGAAAA GAAAGTTCAA TACTTCTCCA AGCTTAGAGA ATTGTTGGAA GAATACAAGT CGATCTTCGT TGTCGGTGTC GACAATGTTT CTTCTCAACA AATGCACGAA ATCAGAAAGG CCTTGAGAGG TGATGCCACC GTGTTGATGG GTAAGAACAC CATGGTCAGA AGAGCCATCA GAGGTTTCTT GTCTGACTTG CCAGAGTTCG AAAAGTTGTT GCCTTACGTC AAGGGTAACG TTGGTTTCAT TTTCACCAAC GCTGACTTGA AGACCATCAG AGACGAAATT GTCTCCAACG TTGTTGCCGC TCCAGCCAGA GCTGGTGCCG TTGCTCCAAA GGATGTCTGG ATTCCAGCCG GTAACACCGG TATGGAACCA GGTAAGACTT CCTTCTTCCA AGCTTTGGGT GTCCCAACCA AGATTGCCAG AGGTACCATT GAAATTGTCT CTGATGTCAA GGTTGTTGAA GCCGAAAACA AGGTCGGTCC ATCTGAAGCC ACTTTGTTGA ACATGTTGAA CATCTCGCCA TTCACCTACG GTATGACTGT TGTTCAAGTG TACGACAACG GCCAGGTCTT CCCATCTTCC ATCTTGGACA TCTCTGACGA TGAATTGGTT GGTCACTTTG TCTCTGCCAT CAACGTCATT GCCTCCATCT CTTTGGCTGT TGGTTACCCA ACCTTGCCAT CTGTCGGTCA CTCTGTCGTC AACCACTACA AGAACGTCTT GGCCTTGTCG ATTGCTACTG ACTACACCTT CGAAGGTTCT GAAGCCATCA AGGACAGATT GGCCAACCCA GAAGCTTACG CTGCTGCTGC TCCAGCTGCT GCTGCTTCCG GTGCCTCTGA AGAAGCTGCT GAAGAAGCCG CTGAAGAAGA AGCTGAAGAA TCTGAAGACG ACGACATGGG ATTCGGTTTA TTCGATTAAA CTGATGATTG AATTAGCTAG TAATACTTTT TTCATTGTGC AATAAATCTT CGTTTTAA
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Protein sequence | MGGTREKKVQ YFSKLRELLE EYKSIFVVGV DNVSSQQMHE IRKALRGDAT VLMGKNTMVR RAIRGFLSDL PEFEKLLPYV KGNVGFIFTN ADLKTIRDEI VSNVVAAPAR AGAVAPKDVW IPAGNTGMEP GKTSFFQALG VPTKIARGTI EIVSDVKVVE AENKVGPSEA TLLNMLNISP FTYGMTVVQV YDNGQVFPSS ILDISDDELV GHFVSAINVI ASISLAVGYP TLPSVGHSVV NHYKNVLALS IATDYTFEGS EAIKDRLANP EAYAAAAPAA AASGASEEAA EEAAEEEAEE SEDDDMGFGL FD
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