| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78463 |
|---|
| Symbol | IF5A |
|---|
| ID | 4839634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Scheffersomyces stipitis CBS 6054 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009045 |
|---|
| Strand | + |
|---|
| Start bp | 355385 |
|---|
| End bp | 356552 |
|---|
| Gene Length | 1168 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 12 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640390949 |
|---|
| Product | Eukaryotic translation initiation factor 5A (eIF-5A) (eIF-4D) |
|---|
| Protein accession | XP_001384727 |
|---|
| Protein GI | 126136407 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
|---|
| TIGRFAM ID | [TIGR00037] translation initiation factor eIF-5A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATCGATTACT GTTATTAAAA ATGGCTGAAG AAGATGTAAG TAGCTACTAT GGGCTCGACT
GCTGCTGTGG ATGAGATGCT CTATTTTGCT ACGGCTGTCT GGGCTTTTTG ACGGTGTTAA
AGTGTCATTT GGCTGATGAA ATTTGGATGG TGAAAAGTGT CGATCTGTAG AAAAGAGACA
GTGAAAAAGT GAGAAAATGA ATGAGACGGG TTCAGATTTG AGGCATATAC AAAGATAACG
GAAGTGAGAA TGAGAACTCA GACGATTATT GAGCAATTAT AGAACTTGTC GCTGTAATTG
TGCTCGTAGC TCCACTTTCG TATTTTTTAT GGAAGGTGCT TATTTTCGGA TGAGTATTTT
CACTTCTGAT TTCATTTCCA ATACCATGGC GACTGGATTG CAAATTTCGG TGCTTGGTTT
TGCACTGTTC TCATTTCTTG GACTAATCCA CTTGTCGTAC AGATCGTAAT GAATGAAAGG
GAAGAAACAA TTACCCAACA CACCAAATGA CATTAAAATA CCTTCAACTC ATGAAATCGT
GAAATATCAA TTTTTCATAT ACTAACTATT TTAGCACACC TTTGAGACCG CCGATGCCGG
TGCCGCTTTG ACCTACCCAA TGCAATGTTC TGCTTTGAGA AAGAACGGTC ACGTTGTTAT
CAAGTCTAGA CCATGTAAGA TTGTCGACAT GTCTACCTCT AAGACTGGTA AGCACGGTCA
CGCCAAGGTC CACTTGGTTG CCATTGATAT CTTCACTGGT AAGAAGTTGG AAGATTTGTC
TCCATCTACC CACAACATGG AAGTTCCAAA CGTTTCCAGA ACCGAATTCC AATTGTTGGA
CATCGATGAC GGTTTCTTGT CTTTGATGAC CCAAGACGGT GACACCAAGG ACGATGTCAA
GGTCCCAGAA GGTGAATTGG GTGAAAAGAT CCAATCCGAA TTCGACGATG GTAAGGACTT
GTTGGTTACT ATCATCTCTG CCATGGGTGA AGAAGCTGCC ATTTCCTTCA AGGAAGCCCC
AAAGCAGTAA GTTGACTGAA GCTGGGTATT CCTTGGAGAT GTAATATATA TAAATACCAG
GGAGACTAGA AGTAGTTCGA TTTATAATGT CGTTTTTACA TAGGCTTCAT TTGTAGGCGT
AATAGTTTCA AATAAAGATC AATGGTAG
|
|---|
| Protein sequence | MAEEDHTFET ADAGAALTYP MQCSALRKNG HVVIKSRPCK IVDMSTSKTG KHGHAKVHLV
AIDIFTGKKL EDLSPSTHNM EVPNVSRTEF QLLDIDDGFL SLMTQDGDTK DDVKVPEGEL
GEKIQSEFDD GKDLLVTIIS AMGEEAAISF KEAPKQ
|
|---|
| |