Gene PICST_78143 details

Gene Information

• Locus tag: PICST_78143
• Symbol: URA7
• ID: 4839173
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Scheffersomyces stipitis CBS 6054
• Kingdom: Eukaryota
• Replicon accession: NC_009045
• Strand: -
• Start bp: 982031
• End bp: 984096
• Gene Length: 2066 bp
• Protein Length: 573 aa
• Translation table: 12
• GC content: 43%
• IMG OID: 640390488
• Product: CTP synthase
• Protein accession: XP_001385199
• Protein GI: 126137351
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0504] CTP synthase (UTP-ammonia lyase)
• TIGRFAM ID: [TIGR00337] CTP synthase

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GCATTTAAGA GGGCATATCT ATAGAACCGT CTATAAACGT ATAGGTATAG GAAAAAACAA 
GTTTCCTGAC TACACTGAAT CCATAGTGCT AAAAAAAATC GTATAGCTTT GAAATCCACA 
TTACGTGTCT CAATTCTATA CCCTTAACAT CTTCCTACCT TTTTTCTGCG TTTTCCTCTT 
AATCCTTTTT GACCAAAAAT TACAATGAAG TACGTTGTTG TGTCTGGTGG TGTCATTTCC 
GGGATCGGTA AGGGTGTTTT AGCTTCTTCC ACCGGTTTGT TGTTCAAGAC TTTGGGCTTG 
AGAGTTACTT CCATCAAGAT CGATCCCTAC ATGAACATTG ACGCTGGTAC GATGTCGCCT 
TTGGAACACG GCGAATGTTT TGTTTTGAAC GACGGAGGTG AAGTCGATTT GGATTTGGGT 
AACTACGAAA GATACTTGAA CATCACTTTG ACCAGAAACC ATAACATTAC TACTGGTAAG 
ATCTACTCAC ACGTGATCGA GAAGGAAAGA AATGGTGATT ACTTGGGAAA GACGGTTCAG 
GTAGTTCCAC ACATCACCAA CGCGATCCAG GACTGGATTG AACGCGTAGC GAAGATTCCT 
GTAGACGACA CAGGGTTGGA GCCTGAAATC TGTATTATCG AATTGGGTGG TACTGTAGGA 
GACATTGAGA GTGCTCCTTT TGTTGAAGCT TTAAGACAGT TTCAATTCCG TGTAGGTGTA 
GACAACTTTG CCTTGATCCA TGTTTCGTTG GTTCCCGTCA TTCACGGAGA GCAAAAAACT 
AAACCAACCC AAGCTGCCAT CAAAGACTTG AGATCGTTGG GTTTGACTCC TGACATGATT 
GCCTGTAGAT GTCAAGAAGA GTTGGAAGTA GCAACGATTG AGAAAATCGG AATGTTTTGC 
CACGTAGGTC CTGAGCAAGT TATTGCCGTT CATGATGTCA ACTCTACCTA TCACGTTCCA 
TTGCTCTTGA AGGAGCAGAG AATGATGAAG TATTTAACCA AGAAGTTGAC TATTGGTGAA 
ATTCCTCAGG ACTCTTTGGA CAAGGGTGAA AAGTTATTGA CCAAATGGAG ACTTTTGACC 
AGTAGCCACG ACAGATCGTT CGAGACCGTA ACCATTGCAC TTGTGGGCAA GTACACACAC 
TTGAAGGACT CATACTTGTC TGTGATCAAG TCGTTGGAAC ACTCTTCAAT GAGATGTCAC 
AGAAGGTTGA AGATCGAATG GGTTGAATCA TCCGACTTGG AAGAGGAAAC CAAGGTCGCT 
AACTTGTCCC AATACCACAA GGCATGGCAC TTTGTCTGTC AGGCTGATGG GATCTTGGTT 
CCAGGAGGTT TTGGCTCGCG TGGTATTGAA GGTATGATTG CCGCTGCCAA GTACGCACGT 
GAAAACGATG TACCATACTT GGGTGTATGT TTGGGTTTGC AGATTGCTGT CATTGAACAG 
GCCAGAAACG TCTTGGGCAT TGAGGGAACA TCTTCTATGG AGTTTGACCC TAACTTAGAT 
GAGGCCACTG CTGCTGTAGT ATACATGCCA GATGTAGACC AGGTCAAGTT GGGTGGTACC 
ATGAGATTGG GTATCCACTC GACCAAGTTT GTCAAGGACA CCGAATGGTC GAAGTTGAGA 
CAGTTGTATG GTGGTGCTGA TGCTGTGTAC GAAAGACACA GACACAGATA CGAAGTCAAC 
CCCAAATTGA TCGACCAGAT CGAAGCTGCT GGCTTGAAGT TCATCGGTAA GGACGAGACT 
GAAACCAGAA TGGAAATGAT TGAATTGAAG GGCCACAAGT TCTTCTGTGG TACCCAATAC 
CACCCCGAAT ACTTGTCAAA GGTTTTGGAT CCATCGAGAC CTTTCCTTGG TTTGGTTGCC 
GCCTCTGCTG GTATCTTGGA AGACGTCTTA GCCAGAGACG ACTTGAACTA CAAAGGTGAG 
TTCTAGTAGA CTTCTTATCT TTTTGTCATC TTTTTGTCAT TATTCTTGTT GTTTCTTACT 
TACTCATACA TTCTTCTTTA TTTAGGAAAG CAGGATGTCC ATTGCATAAT CTCGTACATA 
ATTAACTAAT ACACAAATCC TGAAAC 

 

Protein sequence

MKYVVVSGGV ISGIGKGVLA SSTGLLFKTL GLRVTSIKID PYMNIDAGTM SPLEHGECFV 
LNDGGEVDLD LGNYERYLNI TLTRNHNITT GKIYSHVIEK ERNGDYLGKT VQVVPHITNA 
IQDWIERVAK IPVDDTGLEP EICIIELGGT VGDIESAPFV EALRQFQFRV GVDNFALIHV 
SLVPVIHGEQ KTKPTQAAIK DLRSLGLTPD MIACRCQEEL EVATIEKIGM FCHVGPEQVI 
AVHDVNSTYH VPLLLKEQRM MKYLTKKLTI GEIPQDSLDK GEKLLTKWRL LTSSHDRSFE 
TVTIALVGKY THLKDSYLSV IKSLEHSSMR CHRRLKIEWV ESSDLEEETK VANLSQYHKA 
WHFVCQADGI LVPGGFGSRG IEGMIAAAKY ARENDVPYLG VCLGLQIAVI EQARNVLGIE 
GTSSMEFDPN LDEATAAVVY MPDVDQVKLG GTMRLGIHST KFVKDTEWSK LRQLYGGADA 
VYERHRHRYE VNPKLIDQIE AAGLKFIGKD ETETRMEMIE LKGHKFFCGT QYHPEYLSKV 
LDPSRPFLGL VAASAGILED VLARDDLNYK GEF