| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_78004 |
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| Symbol | GDH2 |
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| ID | 4839659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1080236 |
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| End bp | 1083785 |
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| Gene Length | 3550 bp |
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| Protein Length | 1055 aa |
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| Translation table | 12 |
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| GC content | 43% |
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| IMG OID | 640390974 |
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| Product | NAD-specific glutamate dehydrogenase |
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| Protein accession | XP_001384885 |
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| Protein GI | 126136723 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2902] NAD-specific glutamate dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTCACATTGA TTACTGATTC TCATAGCTTT ATTGTTTATT CGTTGTTTGT ATAAATTGTT
GCTACTTTTC ATTCTAACAT TCATACAATA CGACAATAGA CCATATTGAT AGTCGGACTC
ATCACATAGC TTATCTTGAT AACTCATCCA TTTCGTAAGT TAGCAAAAGA TAACTTGACA
ACCCATTCAT AACTGCTATT GCTCACAATT GCAGCATCCA CCGAATTAAA GATGTCTATC
CAAGAACCAG ACATCCAGCG TTTGACGTTG GAAAGAACGG CTTCCAACTC GTCGTCAGTT
CTCTCCTTGA AACATGGCTA CATCGACTCT CCCTTCTCCG GAAAGAAGGA CCAATATGAA
CAGGTTTTAG ACATCTTGGA CTCCACAGGT TTCATTCCTG AGTCGTTGAT CGAATCTGAA
GCCAGATGGT TCTACGAGTC GTTGGGAATC GACGACGTGT TTTTCGCCAG AGAATCTCCA
GAGGGAATTG CGGGCCACAT CCACTCGTTG TACTCGTGTA AGGTCCAGGC CTACTCAGGC
GACGGTGCTG ATTTCCCCTT GATTCAATAC AAGCGTGAAG CTGACGACCA TGGTGTTTTC
TTTGACTCGT CCGATGTCTC CACGTCGATG TACAAGAACC AGTTCGAAGA GAGAATCGAC
GATAAATACA TCGATCCTTC TTCGTCCGAT TCCATCTCCT ACAGAGTGGA ATACTTCTCG
GCCCCATTGA ACTACAAGAC TGATCCAATC TTGTCTGGTG TTTTCCAGAA CAACAAGACT
TTGCGCGACC AGTTGATGAG ATGTTACTTC GTCTACAAGA ACCAATACGA CCATTTGGAT
GTTTCTGCTG ACGAGACCGA CATCAACAAG ATCGGGGACT CAACCTTCTT GAAAATCGCC
TCGGCCAACA CTAAACAATT GTACGCAGAC ATCGTCAAGA ACGTCGTCAC TACCACTGGT
CCCGTTATCA GACACTTCCC CATCGAAGAC TCTGAAGAAT ACAGAGTGGT TATTGGTTAC
AGACAAAAGA CTTCCGCCAG ATACAACTCG GCCTTGAGCG ACTTGGCCAA CTACTACAAG
TTGCAAACGA CGAGAAAGTA CGTTGAGCAG TTTGCCAACG GGGTCACCAT CATCTCGATG
TATGTCACTT CCAAACAGAA GAAGTTACCA GTGGATCTTT CGATCTACCA GGTCATCAAG
GAAGCTTCGT TGTTGTACTG TATTCCTCAC AACTTCTTCC ATGACAGATT CACCAAGGGT
GAGTTGTCCT TGCAGGAAAG TATCTATGCT CAATCCGGTG TGATCTTCGT CACCCACTTT
TTGAACAGAT TGGGGCCAGA ATACACCAAG TTGGCTACTT TGTTGGACGC TTCAAAGTCT
CTTCAGAATG CCGAAGTGTT GAATAGCTTG AAGAAGAGAT TGAGAGCTGA AACCTACACA
CAAAACTTCA TTCAAGAGGT TTTTGACCAG AGACGTGACA TTGTCAGAAA GTTGTACCGT
CAATTCGCCG ACGTTCACTA CATCCGTTCT TCCATGGAAA AGACATTGTC TTACCAGAGA
TTGTCTCAGA TCACTCCTGT CGGCACAGAA GAAGAGTTTG AGCAATTATT GAGTCGTGAA
TGTTCCCAGA ACGAACACCA TGCCGTAGTT TTGAGAGCAT TGTTCGTTTT CAATAAATCG
ATTTTGAAGA CCAACTTCTA CACTTCCACT AAAGTTGCCC TTTCTTTCAG ATTAGACCCA
TCCTTCTTGC CCTCTTCCGA GTATCCTGAG AAGCCATATG GTATGTTCTT TGTGGTTGGT
AGTGACTTCA GAGGTTTCCA TATCAGATTC AGAGACATCG CTAGAGGTGG TATCAGAATT
GTCAGATCGA GAAATCTTGA TGCCTACAAT GTCAATCTCA GGAATTTGTT TGATGAAAAC
TACAACTTGG CCAATACTCA ACAGAGAAAG AACAAGGATA TTCCAGAAGG TGGATCAAAA
GGTGTTATCT TGTTAGATGC TGGAGCTGCT CAAGAAAGAC CAAAGGCTTG CTTCGAGAAG
TATGTAGATG CCTTGATTGA CTTGTTATTG AAACAGCACA TTCCAGGTGT CAAGGACTCC
TATGTTGACT TGTACAACAA GCCCGAGATT TTGTTCTTGG GTCCAGATGA AGGCACAGCT
GGCTACACAG ACTGGGCAAC TTTGCACGCA AGATCGAGAG GAGCTCCATG GTGGAAGTCT
TTCTTGACTG GTAAGAGTCC ACAGATCGGT GGTATTCCTC ACGATGAGTA TGGTATGACT
ACCTTGTCAG TGAGAGCTTA CGTGAACAAG ATCTACGAAA AATTGAACAT TGACAATTCC
AAGATTAGAA AGTTTCAGAC TGGTGGTCCA GATGGAGACT TGGGTAGTAA TGAAATTAAA
TTATCTAGAG ACGAACAGTA CGTTGGTATT GTTGATGGCT CTGGTGTTAT TGCTGATCCA
AACGGTCTTG ACAAGCAGGA ATTGCTCAGA TTGGCCCACG AGAGAAAGAT GATTGACCAC
TTTGACAAGT CCAAATTGTC GAAGGACGGT TACATAGTGT TGGTAGACGA TGTGGATGTC
ACTTTACCAA ACGGTCATGT AGTAACAAGT GGTGTTGCTT TTAGAAACAC TTTCCATTTG
AAGTTGAAGG AACAATACCC AGACGGTGTT GACTTGTTTG TGCCTTGTGG TGGTAGACCA
GCTGCTATTG ACACCAATAA CGTGCAAGAA TTGATTAACG AAAAGACTGG CAAGAGCATT
GTTCCATACT TTGTTGAAGG TGCCAACTTG TTTATCACTC AAGCTGCTAA ACTAGTATTG
GAGCAGGCCG GAATTGTTAT TTTCAAGGAT GCTTCTACCA ACAAGGGTGG TGTTACGTCA
TCTTCATTGG AAGTTTTGGC ATCTTTAGCC TTTGACGACG AAGGATTTTT GGCTAACATG
TGTGTAGACT CTAAGACCCA CCAAAAGCCG CTCTTCTACC AAGAGTACGT GAAGAATGTG
CAAAAGATTG TTGTTGCCAA TGCTGAAAAC GAGTTCGAAG CCTTGTGGAA ATTAAAGGAA
GAAACCGGTA TTTCTTTCAC CGAATTGTCT GATAAGTTAT CCGTTGCCAT TAACAAATTG
GGAGACGAAT TGGCCAACTC CAAGGAATTG TGGAACGATG ACGTTGACTT TAGAAACGCA
GTCTTACTTG ACTCCTTGCC TCCATTGTTG TTAGAAGTTG TTGGAATCGA CAGCGTATTG
ACCAGAGTTC CAGAAGCCTA CTTGAGAGCA ATCTTTGCTA CACACTTGGC TTCTCGTTTC
GTCTACACCA GAGGTATCGA TTCCAACCCA GCAAAATTCT TGGAATTCAT TTCTTCCACC
AGAAAGGAAT ACGTCAAGAA AGGCTTACTC AAACACTAAT CTTCTTTTAC TCATTGTTGC
TTTTGCCAAG CTGCTGTTTA TTTATTTACA TACTCCTGCT TTCATGTTTG CTTTACTAAT
TCCAAACTCT TCATTTCTAT TAGATGTAAT GATAATTATA GACTTTAATA TAAAGCCAGA
ATCTATGTAC
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| Protein sequence | MSIQEPDIQR LTLERTASNS SSVLSLKHGY IDSPFSGKKD QYEQVLDILD STGFIPESLI
ESEARWFYES LGIDDVFFAR ESPEGIAGHI HSLYSCKVQA YSGDGADFPL IQYKREADDH
GVFFDSSDVS TSMYKNQFEE RIDDKYIDPS SSDSISYRVE YFSAPLNYKT DPILSGVFQN
NKTLRDQLMR CYFVYKNQYD HLDVSADETD INKIGDSTFL KIASANTKQL YADIVKNVVT
TTGPVIRHFP IEDSEEYRVV IGYRQKTSAR YNSALSDLAN YYKLQTTRKY VEQFANGVTI
ISMYVTSKQK KLPVDLSIYQ VIKEASLLYC IPHNFFHDRF TKGELSLQES IYAQSGVIFV
THFLNRLGPE YTKLATLLDA SKSLQNAEVL NSLKKRLRAE TYTQNFIQEV FDQRRDIVRK
LYRQFADVHY IRSSMEKTLS YQRLSQITPV GTEEEFEQLL SRECSQNEHH AVVLRALFVF
NKSILKTNFY TSTKVALSFR LDPSFLPSSE YPEKPYGMFF VVGSDFRGFH IRFRDIARGG
IRIVRSRNLD AYNVNLRNLF DENYNLANTQ QRKNKDIPEG GSKGVILLDA GAAQERPKAC
FEKYVDALID LLLKQHIPGV KDSYVDLYNK PEILFLGPDE GTAGYTDWAT LHARSRGAPW
WKSFLTGKSP QIGGIPHDEY GMTTLSVRAY VNKIYEKLNI DNSKIRKFQT GGPDGDLGSN
EIKLSRDEQY VGIVDGSGVI ADPNGLDKQE LLRLAHERKM IDHFDKSKLS KDGYIVLVDD
VDVTLPNGHV VTSGVAFRNT FHLKLKEQYP DGVDLFVPCG GRPAAIDTNN VQELINEKTG
KSIVPYFVEG ANLFITQAAK LVLEQAGIVI FKDASTNKGG VTSSSLEVLA SLAFDDEGFL
ANMCVDSKTH QKPLFYQEYV KNVQKIVVAN AENEFEALWK LKEETGISFT ELSDKLSVAI
NKLGDELANS KELWNDDVDF RNAVLLDSLP PLLLEVVGID SVLTRVPEAY LRAIFATHLA
SRFVYTRGID SNPAKFLEFI SSTRKEYVKK GLLKH
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