| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_77997 |
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| Symbol | CDC60 |
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| ID | 4839124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 527207 |
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| End bp | 530545 |
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| Gene Length | 3339 bp |
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| Protein Length | 1093 aa |
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| Translation table | 12 |
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| GC content | 44% |
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| IMG OID | 640390439 |
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| Product | cytosolic leucyl tRNA synthetase |
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| Protein accession | XP_001384764 |
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| Protein GI | 150865514 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0495] Leucyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00395] leucyl-tRNA synthetase, archaeal and cytosolic family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.180123 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTC CCATCAAGTT GGAAAACACC GTGCGTAGAG ATACCTTAAT TGATATTGAA
AAGAAATATC AGAAAATCTG GGCTGACCAA AAATTGTTTG AAGTCGATGC CCCTACCATT
GAAGAGGATC CCACTGAAGA TGCGGACGAA TTGAGAAAGA AGTACCCCAA GTACTTCGCC
ACTATGGCCT ACCCATACAT GAACGGTGTC TTACATGCGG GCCATTCCTT CACTTTGTCC
AAAGTTGAGT TTGCCACTGG TTTTGAAAGA ATGAACGGAA AGAGAGCCTT ATTCCCACTC
GGTTTCCACT GTACTGGTAT GCCGATCAAG GCTGCTGCCG ACAAGATCAA GCGTGAGATT
GAAATGTTTG GCTCAGACTT TTCCGGAGCT CCAACTGAAG AAGAAGAAGA AGAACCAAAG
AAAGAGACTG CTGCCAAGTC TGAAGATGTC ACCAAGTTCA AGGCTAAGAA GTCCAAGGCT
GTAGCTAAGC AAGGAAGAGG TAAGTACCAG TTTGAGATCA TGATGCAATT GGGAATTTCC
AAGGAAGAAG TTGTAAAGTT TTCTGACTCG GACTACTGGC TCAAATTCTT CCCTCCTTTG
ACCCAGAAAG ATGTTACAGC TTTTGGTGGA AGAGTCGACT GGAGAAGATC TATGGTGACT
ACCCCAGCCA ACCTCTACTA CGATGCCTTC GTCAGATGGC AGATCAATAG ATTGAGAGAT
GTGGGCAAGA TCAAGTTCGG TGAAAGATAC ACCATCTACT CTGAATTGGA TGGACAAGCC
TGTTTGGACC ACGACAGACA ATCTGGTGAA GGTGTCAACC CACAGGAGTA CACAGGCATT
AAAATTGAAG TCACCGAATT TGCCGACGCT GCTCAGAAGT TATTTTCACA AGAGAAGTTC
GACTTTGCCA ACAAGAAGAT CTACTTGGTT GCAGCTACTT TGAGACCAGA AACCATGTAC
GGTCAAACTT GTTGTTTCGT ATCGCCCAAG CTCGACTACG GTATCTTTGA TGCTGGCAAT
AACGAGTTCT ACATTACTAC TGAACGTGCC TTCAAGAACA TGTCGTACCA AAAATTGACC
CCCAAGAGAG GATACTACAA GCCTGAAGTT AGAATCAACG GTGCCGCTTT GGTGGGTTCA
AAGATCCACG CTCCTTTGGC TGTGCACAAG GAGTTGAGAG TGTTGCCTAT GGAAACCGTA
TTGGCCTCAA AGGGTACCGG TGTTGTGACA TGCGTCCCTT CTGACTCTCC AGATGATTTC
GTTACCACCA GAGACTTGTA CAACAAACCC GAATACTACG GTATCGAGAA GGAATGGGTT
CAACCGGAAA TCATCCCAAT TGTCAAAACG GAGAAATATG GTGACAAGTG CGCAGAATTC
TTGGTCAACG ACTTAAAAAT TCAGTCTCCA AAAGATGCTG TTCAATTGGC TCAAGCTAAG
GAGCTTGCCT ATAAAGAAGG TTACTACAAT GGTACCATGG TCATTGGCAA ATATGCCGGT
GAGAAGGTCG AAGCTGCAAA GCCAAAGGTC AGAGCTGATT TAGTAGCTTC TGGAGAAGCT
TTCGTTTACA ATGAGCCAGA AGGTCTTGTT ATTTCCAGAT CAGGCGACGA GTGTATTGTT
TCATTAGAGG ACCAATGGTA CATTGACTAC GGTGAAGAAA CCTGGAAGGC TCAGGCCTTG
GACTGTTTGG CCCACATGCA AACCTTTGCT AAGGAAACTA GACATGGATT TGAAGCTGTC
TTGGACTGGT TGAAGAATTG GGCTGTGACC AGAAACTTCG GTTTGGGTAC CAGATTGCCA
TGGGATGAAA GATACTTGGT AGAGTCTTTG TCTGATTCTA CAATCTATAT GGCCTACTAC
ACCATTGATC GTTTCCTCCA CTCGGACTAT TACGGTAAGG TATCCGGTAA GTTTGCCATC
AAACCAGAGC AAATGACCGA TGAAGTTTTT GATTTCATTT TCACTCGTCG TGAAAACATC
AAGACCGATA TCCCTATCGA ACAATTGAAG GCCATGAGAA GAGAGTTTGA ATACTTCTAC
CCTCTTGATG TGAGAATTTC AGGTAAAGAC TTGATTCCAA ACCATTTAAC CTTCTTTATC
TACACACACG TAGCCTTGTT CCCCAGACAG TTCTGGCCCC AGGGTATCAG AGCTAATGGT
CACTTGATGT TGAACAACGC CAAGATGTCC AAGTCCACTG GTAATTTCAT GACCTTGGAA
CAAATCGTAG AAAAGTTCGG TGCTGATGCT TCTAGAATTG CTTTGGCTGA TGCTGGTGAC
TCTGTAGAAG ATGCCAACTT CGACGAGTCT AATGCTAATG CTGCTATCTT ACGTTTGACT
ACTTTGAAGG AATGGTGTGA AGAAGTCGCC AAGACCAAGG ACTCGTTGAG AACTGGTCCA
ACGGACTCTT TCTTTGACCA GGCTTTTGAA AACGAAATGA ACAGCTTGAT TGAAGAAACT
TATGAATTCT ACAACAACAC TCACTACAAG GCTGCCTTGA AGACAGGTTT GTTTGATTTC
CAAGCTGCCA GAGACTACTA TAGAGACTCT GTATCCAACA ACATTGGCAT GCACAAGGAT
TTGGTTTTGA AGTATATTGA AACCCAGGCT TTGATGTTGG CACCAATTGC TCCTCACTTT
GCCGAGTACA TCTACGTTGA AATCTTGGGT AATAAGGGCA CCGTGCATAA CACTGCTTTC
CCAAGAGCCA CCAAGGAAAT CTCTAAGTCT ATTGCCGACG CCTTACTGTA CGTCAGAGAC
ATTTCCAGAT CGATTCGTGA AGCCGAAGCC AATGTTTTGA AGAAGAAGAA GGGTGGCAAG
CCATCTGAAG TCGACGCTTC CAAGCCAGCA AAATTAACCT TGTTTGTATC TAACTCGTAC
CCAGACTGGC AAGACAGCTA CATTGACCTC GTGAGAGAGT TGTACGAAAA ACAATCTTTG
GATGACAACA AGGCTATTAG AGAAAAGGTC GGAAAAGACA TGAAGCGTGC CATGCCATTT
ATTTCGCTCT TGAAGCAGAG ATTGACTGTA GAGAACCCTC AAACCGTCTT CAACAGAAAG
TTGACGTTCA ACGAAACAGA TGTGCTTAAG TCTGTTACTG CCAACATCAA GAAGGCAACC
TACTCTGTCA ATGTCGAAGA AGTTGAAATT ATTTCGTTTG AGAACGGTGC CAAACAGGGC
CAAAACGTTC TCACTGGTGA ATCTGTAGAA ATCTCCGTCA CCGGTAAGAT TGTAGACTCT
GCTGTTCCAG GTGAGCCAGG TATCATGCTT AACAACCTCT AGATTGTTCA TAGAAGCGGA
TACATAGTAA TGTAGACGAT AATAAATACT GTATGATAT
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| Protein sequence | MSAPIKLENT VRRDTLIDIE KKYQKIWADQ KLFEVDAPTI EEDPTEDADE LRKKYPKYFA
TMAYPYMNGV LHAGHSFTLS KVEFATGFER MNGKRALFPL GFHCTGMPIK AAADKIKREI
EMFGSDFSGA PTEEEEEEPK KETAAKSEDV TKFKAKKSKA VAKQGRGKYQ FEIMMQLGIS
KEEVVKFSDS DYWLKFFPPL TQKDVTAFGG RVDWRRSMVT TPANLYYDAF VRWQINRLRD
VGKIKFGERY TIYSELDGQA CLDHDRQSGE GVNPQEYTGI KIEVTEFADA AQKLFSQEKF
DFANKKIYLV AATLRPETMY GQTCCFVSPK LDYGIFDAGN NEFYITTERA FKNMSYQKLT
PKRGYYKPEV RINGAALVGS KIHAPLAVHK ELRVLPMETV LASKGTGVVT CVPSDSPDDF
VTTRDLYNKP EYYGIEKEWV QPEIIPIVKT EKYGDKCAEF LVNDLKIQSP KDAVQLAQAK
ELAYKEGYYN GTMVIGKYAG EKVEAAKPKV RADLVASGEA FVYNEPEGLV ISRSGDECIV
SLEDQWYIDY GEETWKAQAL DCLAHMQTFA KETRHGFEAV LDWLKNWAVT RNFGLGTRLP
WDERYLVESL SDSTIYMAYY TIDRFLHSDY YGKVSGKFAI KPEQMTDEVF DFIFTRRENI
KTDIPIEQLK AMRREFEYFY PLDVRISGKD LIPNHLTFFI YTHVALFPRQ FWPQGIRANG
HLMLNNAKMS KSTGNFMTLE QIVEKFGADA SRIALADAGD SVEDANFDES NANAAILRLT
TLKEWCEEVA KTKDSLRTGP TDSFFDQAFE NEMNSLIEET YEFYNNTHYK AALKTGLFDF
QAARDYYRDS VSNNIGMHKD LVLKYIETQA LMLAPIAPHF AEYIYVEILG NKGTVHNTAF
PRATKEISKS IADALSYVRD ISRSIREAEA NVLKKKKGGK PSEVDASKPA KLTLFVSNSY
PDWQDSYIDL VRELYEKQSL DDNKAIREKV GKDMKRAMPF ISLLKQRLTV ENPQTVFNRK
LTFNETDVLK SVTANIKKAT YSVNVEEVEI ISFENGAKQG QNVLTGESVE ISVTGKIVDS
AVPGEPGIML NNL
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