| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_67974 |
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| Symbol | SRP1 |
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| ID | 4839314 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 1707596 |
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| End bp | 1709665 |
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| Gene Length | 2070 bp |
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| Protein Length | 544 aa |
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| Translation table | 12 |
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| GC content | 45% |
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| IMG OID | 640390629 |
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| Product | Importin alpha subunit (Karyopherin alpha subunit) (Serine-rich RNA polymerase I suppressor protein) |
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| Protein accession | XP_001385017 |
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| Protein GI | 150865693 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5064] Karyopherin (importin) alpha |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GATTCCGCAG CTGAGACTTG CCCTTTCTCG TTATCATTAT CCGTTAACTT CATCACCTTA
ATTGTAAACA TTTCATACAT CCAGCCAATC ACAGTCAACC ATGGACGCAG ATGCCACTAA
CCGTTTTGTG CCCGAGTACC GTCGTACCAA CTTCAAGAAC AAGGGTCGTT TCCAGAGCGA
TGAGTTGAGA AGAAGAAGAG AAACGCATCA AGTGGACTTG AGAAAGCAGA AGAGAGAAGA
AGTATTGCTG AAGAGAAGAA ACTTCCATAA TGAAAATGCT GCCGATGATT CTGAAGATGA
AGACGAGTAC AGTACCCAGG TTTCCAATGA CGAGACCCAG TTCTACTCGA AGTTGCAACA
GGACCTCCCC AAGATGATTG AAATGATCCA GGCTGCCGAC TTCGATAATC AACTCGCTGC
TACCGTCAAA TTCCGCCAGA TCTTATCGCG TGAACACAAT CCACCTATCG ATCTCGTGAT
CCAGTCCGGC GTGATCCCCA CTTTGGTGGA GTTCATGAAG AACGAACATC CCGATATGTT
GCAGTTGGAA GCGGCATGGG CTTTGACCAA CATCGCTTCA GGTAATTCTG AGCAGACCCG
TGTCGTTGTT GATGCCAACG CCGTTCCTCT ATTCGTTCAC TTGTTGTACT CGCAATCGCT
TGAGGTCAAG GAACAGGCCA TCTGGGCTTT AGGAAATGTT GCTGGTGACT CCACCGAAAA
CAGAGACTAT GTCTTGGAAT GCAACGCCAT GGAGCCTGTT TTGTCGCTCT TCAACAGCAC
AAAGATGTCG TTGATCAGAA CAGCTACGTG GACATTGTCT AACTTGTGTA GAGGCAAGAA
CCCCCAGCCA GACTGGAACA TCGTTCAACT GGCCATTCCC ACTTTGGCCA AATTGATCTA
CTCTGTAGAC TCAGAGACTT TGGTTGATGC CTGCTGGGCT GTTTCTTACT TGTCTGATGG
TACTTCCGAG GCTATACAGG CTGTTGTTGA TGCCCGTATC CCTCATCGTC TTGTCGAGTT
GTTGGGCCAC GAATCGACTT TGGTCCAGAC CCCAGCTTTG AGAGCTATTG GTAACATCGT
CACCGGTACA GACTTCCAGA CTCAGATCGT CATAAACGCT GGCGCATTGC GGGCATTGGC
TCCGTTGTTG AACTCGCCTA AGGAAACCAT TCGTAAGGAA GCCTGTTGGA CCATCTCCAA
TATCACAGCA GGTAACACGG ATCAAATTCA GGCGGTTATT GACGCTAACC TCATTCCACA
AATCATCAGA TTGTTACAGC ACGGTGATTA CAAGACCAAA AAGGAAGCCT GTTGGGCCAT
TTCCAACGCT TCTTCGGGTG GTTTGACCAA GCCAGACCAG ATCCGCTACT TGGTTAACCA
AGGCTGTATC AAGCCTTTGT GTGACTTGTT GAGCGTGGCT GACTCCAAAA TAATTGAAGT
CACGTTGGAC TCTTTGGACA ACATCCTTAA GATGGGTGAA ATGGACAAGG AAGCCCTCAA
TACACAGGTC AATGAAAACG CTTTGTACAT TGAAGAAGCT GGTGGTATGG AAAAAATCTT
CGAGTGTCAG ACCAACCAAA ACGAAAAGAT CTACCAAAAG GCTTACCATA TCATCGAAAA
GTACTTCTCT GACGAAGATG ACCAAATAGA TGACGAAGGC GTAGCCCCTC AGACCTACGG
GGATTCATTT GGTTTCGGCG TTGATCCAAG CCAACAGCAA AACTTCCAAT TCTAATCTGA
AATATAGAAA TTGAAATGAA GTCGAGATTT TGAATTGATG TAAATCTATA TTTGTTCGAA
AGAAGTCCAA CAAACATTGA TATACGATTC ATATTCATAG ATTACGAAAC AAACCATAAC
TTACATAAGC CGGAGTCAGC TTCTGGCTCT TGCTTGTCTC ATGATCTCTA TCATCTCATC
TTATATATAC TGTCTCTAGC CCTCTTCCAT ATATAGCAAG TTTATCGTCT AATGCCTAAT
TCTCTAAGAT TCGGTAAGAG GCTTCCACAG CCAAGGAGAA CATAGTTTAT GTATATCTCG
CAAGTGAAAC AACATATTCT CTATAATAAA
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| Protein sequence | MDADATNRFV PEYRRTNFKN KGRFQSDELR RRRETHQVDL RKQKREEVLS KRRNFHNENA
ADDSEDEDEY STQVSNDETQ FYSKLQQDLP KMIEMIQAAD FDNQLAATVK FRQILSREHN
PPIDLVIQSG VIPTLVEFMK NEHPDMLQLE AAWALTNIAS GNSEQTRVVV DANAVPLFVH
LLYSQSLEVK EQAIWALGNV AGDSTENRDY VLECNAMEPV LSLFNSTKMS LIRTATWTLS
NLCRGKNPQP DWNIVQSAIP TLAKLIYSVD SETLVDACWA VSYLSDGTSE AIQAVVDARI
PHRLVELLGH ESTLVQTPAL RAIGNIVTGT DFQTQIVINA GALRALAPLL NSPKETIRKE
ACWTISNITA GNTDQIQAVI DANLIPQIIR LLQHGDYKTK KEACWAISNA SSGGLTKPDQ
IRYLVNQGCI KPLCDLLSVA DSKIIEVTLD SLDNILKMGE MDKEALNTQV NENALYIEEA
GGMEKIFECQ TNQNEKIYQK AYHIIEKYFS DEDDQIDDEG VAPQTYGDSF GFGVDPSQQQ
NFQF
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