| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_65827 |
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| Symbol | ALT1 |
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| ID | 4839624 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1490658 |
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| End bp | 1492415 |
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| Gene Length | 1758 bp |
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| Protein Length | 544 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390939 |
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| Product | putative allantoate permease |
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| Protein accession | XP_001385291 |
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| Protein GI | 126137535 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.429741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGACA CCAAGGAAAA GGACGCTAAC GTCACGGTCG ATATCCGCAA GGAAATTGAC
ATTATCACTG ATTCGGAAAG CACCACTAGT TCTTCGTTCG AGAAAAATCC ATTTTTGGAC
CCTGTTGTTG CCGAACATTA CAGAGAAGTC TACGAGAAAG CCCAGTACGA ATGTCGTAGC
GCTTTTGACC CAGAATTTGA GTGGGAACCA CAGGAAGAAA AAAAGCTTAT CAGAAAGTTG
GATTTTCGTG TTGCATTTAC GGCATGTTTG ATGTTCCTCA GTTTGCAAGT TGATAGAGGA
AATCTCTCCC AAGCTGTTTC GGATAACTTG TTAGATGATT TGAAATTGAC AACCAATGAC
TTTAACACTG GTAATACTAT TTTCTTAGTG TGCTTTCTCT TGGCTGAAAT TCCTTCCCAG
CTTATCTCCA AAGCATTGGG TCCTGATATT TTCATCCCAT TTCAAATTTG TGCTTGGAGT
ATTGTTGCTA TGAGTCAAGG TGCCTTGCAG GGCAAGGCTT CTTTCTACGC AACTAGAGCT
TTGATTGGAA TGCTTGAAGG TGGGTTTATT GCAGACTTGG TTTTGTGGTT GAGTTACTTC
TACAAGAGTA ATGAATTGCC TATTAGATTG TCATGGTTCT GGACCACTTT ATCTTTGTGT
GATATTGGTA CCTCTTTGGC TGCCTTTGGT TTGCTTCGTC TTCGTGGCCA TCATGGTCTT
GCTGGTTGGA GATGGTTATT TATTATTGAA GGTGCCTTTA CTTTGACTAT TGGTTTGTTG
TCCTTCTACT TGATGGTTCC TTCTGCGTTG CAAACAAAAA GCTGGATGCA CCCTAAGGGC
TGGTTCAATG AGCGCGAAGA AAAGATAGTG GTCAACAGAG TTTTGAGAGA CGATCCATCC
AAGGGTGATA TGCACAACAG ACAGGCTTTA TCGCCCAGGA TGATCTGGAA GGCTTTGTCC
GATTACGATT TATACCCTCT TTATGCAATT GGTTTACTTG CTTATGCCCC AACATCTACC
GTGAGTGCGT ATATGACTCT TACATTGAAA CAGTTGGGTT TCTCTACATT CAACACTAAT
TTGTTGACTA TCCCATCCAG TGTTCTTCAT ATTATCCTCT TGTTGGCTAT TACTTGGTTA
TCGGAAAGAG TCAATCAAAG GGCTTTGGTC TCTTTGGCTG TCCCCCTTTA TACTGTTCCT
TTGATGGGTA TTCTTGCGTT CTGGAGCGAG TCTATGTCGA ATGCTTGGGG TACTTGGGCA
GTGTTGACCG TGCTCTTGGG TGTTCCTTAC ATCCATGCCA TTGTTGTCGC CTGGGTTTCA
AGAAACTCGT ACGCTATTAG AAATCGGTCT GTGGCAAGTG CGACTTATAA CATGGCTGTA
CAATTGGGTA ACATCTATGC TAAGAATATC TATAGACAAG ATGATAAACC ATTGTACAGA
AGGGGTAATA GGCAATTGTT CATTTTGGCT ATTGCTTTGT TCCCATTGCT TCTTCTCGTA
AAGGCATACT ACATATACAG AAATAAGCAA AAGGATACGA TCTGGAATGC CATGACAGCA
GAAGAAAAAG ACGACTATAT GAAGAACAGT ACTGATGAAG GCAATAAGAG ATTGGACTTC
AGATTTGCTC ACTAGTATTA GTTCGTGGTT TTCTTTGTCG AGCATCAACT TGCTACTTTC
AATTCCTGCG CGTGATTTGC TATATAGATA TATAGGTGAT TTAATTATTA TTAATTTACT
GGCTACACCT CGTGGTCG
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| Protein sequence | MADTKEKDAN VTVDIRKEID IITDSESTTS SSFEKNPFLD PVVAEHYREV YEKAQYECRS
AFDPEFEWEP QEEKKLIRKL DFRVAFTACL MFLSLQVDRG NLSQAVSDNL LDDLKLTTND
FNTGNTIFLV CFLLAEIPSQ LISKALGPDI FIPFQICAWS IVAMSQGALQ GKASFYATRA
LIGMLEGGFI ADLVLWLSYF YKSNELPIRL SWFWTTLSLC DIGTSLAAFG LLRLRGHHGL
AGWRWLFIIE GAFTLTIGLL SFYLMVPSAL QTKSWMHPKG WFNEREEKIV VNRVLRDDPS
KGDMHNRQAL SPRMIWKALS DYDLYPLYAI GLLAYAPTST VSAYMTLTLK QLGFSTFNTN
LLTIPSSVLH IILLLAITWL SERVNQRALV SLAVPLYTVP LMGILAFWSE SMSNAWGTWA
VLTVLLGVPY IHAIVVAWVS RNSYAIRNRS VASATYNMAV QLGNIYAKNI YRQDDKPLYR
RGNRQLFILA IALFPLLLLV KAYYIYRNKQ KDTIWNAMTA EEKDDYMKNS TDEGNKRLDF
RFAH
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