Gene PICST_61090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_61090 
SymbolGCN3 
ID4839260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1602565 
End bp1603500 
Gene Length936 bp 
Protein Length311 aa 
Translation table12 
GC content43% 
IMG OID640390575 
Producttranslation initiation factor eIF-2B alpha subunit (GCN3) 
Protein accessionXP_001385003 
Protein GI150865681 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1184] Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.571907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CTTTTGATAT CACAAAAACG TATCTCCAGT TTTTGGAAGA TGATAGAGAT 
TTGACAATGC CCATCGCAGC CATCGAGTCG CTAGTCACTA TGCTCAGAGT TAAGCAGCCT
TCCACATCGT CAGAATTGAT CAACTTGGTC AAGTCTAACA TCGACACGTT GAAGTCGTCT
ATTCCCAACG CCATTTCGCT TTCAGCTGGT TGTGATTTGT TCATGAGATT TGTATTAAGA
AACACCAACT TGTATTCTGA CTGGGAGTCT TGTAAGAAGA ACTTAGTGGA AAATGGCCAG
CTTTTCGTTC AAAGAGCCAA AGAATCGAGA AACAAACTGG CTGAATATGG TCTTCCTTTC
ATCAAGGATG ATGATACCAT CTTGGTGCAC TCGTTTTCAC GTGTAGTATA TACGTTGTTG
AAGAAGGCTA AGACCGAGCG ATTAGTTCGT TTCAGAGTCA TAGTCACGGA GTCCAGACCT
ACTGGTTTGG GATTCTACAT GGCCAAAAAG TTGCGTGAAG CCGAGATACC AGTGGAAGTA
ATAGTAGACA ACGCAGTAGG GTACATTATC CACAAAGTCG ACAAGATATT GGTTGGTGCT
GAGGGCGTAG CTGAAAGTGG AGGAATCATC AACCATATTG GTTCGTACCA GATCGGATGT
TTGGCCAAAG TCAACAACAA GCCTTTCTAT GTAGTCACTG AGTCACACAA ATTCGTCAGA
TTGTTCCCAT TGGCTCCAAA CGATTTACCA ACCAGTGTCA GAAACCTTTT GTCAGAAGCT
GATGAAAAGG AAAAGAACCC AGACGACCAA AGCATATTGA ACGAGCACAA GCTCGACTTT
ACTCTGCATG AATATATCAC TGCATTGATC ACTGACTTGG GAGTATTGAC GCCGTCAGCT
GTGTCTGAGG AGTTGATCAA GGTGTGGTAC GATTAG
 
Protein sequence
MSDAFDITKT YLQFLEDDRD LTMPIAAIES LVTMLRVKQP STSSELINLV KSNIDTLKSS 
IPNAISLSAG CDLFMRFVLR NTNLYSDWES CKKNLVENGQ LFVQRAKESR NKSAEYGLPF
IKDDDTILVH SFSRVVYTLL KKAKTERLVR FRVIVTESRP TGLGFYMAKK LREAEIPVEV
IVDNAVGYII HKVDKILVGA EGVAESGGII NHIGSYQIGC LAKVNNKPFY VVTESHKFVR
LFPLAPNDLP TSVRNLLSEA DEKEKNPDDQ SILNEHKLDF TSHEYITALI TDLGVLTPSA
VSEELIKVWY D