| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60468 |
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| Symbol | UTP13 |
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| ID | 4839206 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1666896 |
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| End bp | 1668632 |
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| Gene Length | 1737 bp |
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| Protein Length | 563 aa |
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| Translation table | 12 |
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| GC content | 42% |
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| IMG OID | 640390521 |
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| Product | U3 snoRNA associated protein |
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| Protein accession | XP_001385323 |
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| Protein GI | 126137599 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0541786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA ACCGTAATGG AGAGGATGTG GTAGTGCCGC CCAAGGACGA TGAAGAATTG
TACTTGGAGA AATTGGTGTT TGGCGATGCC GATGGATTTG AGAAGAACTT AAAGAAAACA
GACAATCTCT TTGACTACTC TTCTGATGAA GAAGACGATG GAAGCAGTGA CAAATTTTTC
CATGATGCTA GCAGTAATTC TTCGGAGGAC GAAGATGATT TGGAGAATGT TCAGGATGAT
GATTTGTTCT TCATTGACGA CGGCCAGAAA CAGAGCGAAA ATGAAGACGA AGACGAAGAT
ATGGATGTAG ATGTACAATA CGACGAAGAA GAGGAAGACG TTTCTGATGA AGAAGCAAAT
GCATGGGAAG ACAGTGACGA CGAGAAATTG AACGTCTCTT TAATTGCTTC GGACAAATTA
AAAAAGTTGA GAAAGACTAC CCATGACACA AGCATCTCTG GAAGATCATA CATAGTTAGA
TTGAGAAACC AGTTTGAGAA GATATATCCA CGTCCCGAAT GGATTGAGGC ATTAGAAAGT
GACCACCAAG ACGAAAACGA GGATGACTCA GATATAGAAA TAGACCGCGA AGATGACGAG
CCTTCTGGAG TTGCAGACAA TGATACCAAT TCCGTGTTGA AAATATTGTC TTCGACACAG
CAATTTGTCA TAACTAAACA ATTGAAATTG ATTTCACCCA ACAAGGTCTC GATAACGAGG
TTGAAGGATG CCAACTATCA GAAGATCTCT AAATCAGCGA TCCAATCGTT GTCTTTCCAT
CACAGCCATC CGTTGTTAAT GACTGGAGGA TTTGACAGAA CTATTCGTAT CTACCACATC
GACGGCAAGA TCAACAGTCT TGTGACGTCG TTGCATTTGC GAAACTCTCC AATCAGCGTC
TGTCATTTCT CTCCCCTTGG TGCTAATACT AAGGATGGAG ACAAGAACTT GGTGTATGCT
GCTGGTAGAA GACGTTATAT GAACAAGTGG GACTTGAACT CTGGGGAAGT TGAAAAGATT
TCAAGAATGT ATGGCCACGA ACAACACCAG AAGTCTTTTG AATACTTCAA AATATCTCCA
AAGGGTACCT TTATTGGTTT AACTGGTAAT AGCGGATGGT GCAATATTTT GAACGGAGCT
ACCGGCCAAT GGGTCAAGGG TTTCAAGATT GAAGGAACTA TTGTGGACTT CGAGTTTTCT
AAAGACGAAT CATTCATTGT CATTATAAAC ACTGCTGGCG AAGTATGGGA GTACGAATTG
ACTGCTCAGG ATGCTGTAAA AGAAGCAAAG GAAAACAAAA GAGCCAATAC GTACAACAAG
GTGTTAAGAA GATGGCAAGA TGATGGTGGA ATTGGCATCA CGAAGATAAA ATTGGGGGGT
CCTAAAAATA GGTGGTTGGC TATTGGAACA AATAATGGTT TCGTGAACAT TTATGACCGT
AACACATTTA CAGAAAGTAC CAAACGCAAA CCTTTCAAGA CGGTAGAAAA CTTGGTTACC
TCTATCTCAT CGCTAGCATT CTCTCCAGAC GGACAGATTT TGTGTATAGC ATCCAGAGCA
AAGAGGGATG CCATGAGATT GGTACATTTA CCATCGGGCT CCGTATACTC CAACTGGCCC
ACTAGCGGTA CCCCACTTGG AAAAGTCACT GCTGTAGCAT TTTCACCCAA TAATGAAATG
TTGGCTGTGG GTAACGAAGC AGGAAAGGTG ACGCTCTGGA GATTGAACCA CTACTAA
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| Protein sequence | MPKNRNGEDV VVPPKDDEEL YLEKLVFGDA DGFEKNLKKT DNLFDYSSDE EDDGSSDKFF
HDASSNSSED EDDLENVQDD DLFFIDDGQK QSENEDEDED MDVDVQYDEE EEDVSDEEAN
AWEDSDDEKL NVSLIASDKL KKLRKTTHDT SISGRSYIVR LRNQFEKIYP RPEWIEALES
DHQDENEDDS DIEIDREDDE PSGVADNDTN SVLKILSSTQ QFVITKQLKL ISPNKVSITR
LKDANYQKIS KSAIQSLSFH HSHPLLMTGG FDRTIRIYHI DGKINSLVTS LHLRNSPISV
CHFSPLGANT KDGDKNLVYA AGRRRYMNKW DLNSGEVEKI SRMYGHEQHQ KSFEYFKISP
KGTFIGLTGN SGWCNILNGA TGQWVKGFKI EGTIVDFEFS KDESFIVIIN TAGEVWEYEL
TAQDAVLRRW QDDGGIGITK IKLGGPKNRW LAIGTNNGFV NIYDRNTFTE STKRKPFKTV
ENLVTSISSL AFSPDGQILC IASRAKRDAM RLVHLPSGSV YSNWPTSGTP LGKVTAVAFS
PNNEMLAVGN EAGKVTLWRL NHY
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