| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_60398 |
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| Symbol | |
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| ID | 4839543 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | - |
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| Start bp | 1317737 |
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| End bp | 1321981 |
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| Gene Length | 4245 bp |
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| Protein Length | 1367 aa |
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| Translation table | 12 |
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| GC content | 39% |
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| IMG OID | 640390858 |
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| Product | predicted protein |
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| Protein accession | XP_001385256 |
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| Protein GI | 126137465 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components
[COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.222643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.152228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | CAATTATCTA ATGAAAGGAG ATGGTTCTCA TGGTTATTTT CTAAAGAAGT GCCTACTGTT
CCTTTGCCTG AAGAAAGAAT TGAGTATGCT TCTAAGCATG CCAACCCACT TCAGACACTT
CTTTTCTGGT GGTTATGGCC GATTTTAGTT AAAGGTTACA AGAGAACTTT GCAGCCAAAT
GATTTGTGGA TCTTGCCCAC TGAAATGACT GTAGAAGACA TGCACAAGAG ATGGGAAGAA
AACATGCAAA AGATTTTGGA AAAGGCTGAG AAAAAGCATT TAAAGAAAAA CGACGACTTG
TCTAACTTCG AATGGCCATT GTGGGCTGTT CCTTATGCTC TCTACTTGAC TTTCAAACTC
CAGTATACTA TGAGTACCAT CTTATTAGCA TTGTCATTCT GTTGTCAATC GTTATCGCCA
TTGATCACTA GACGTTTGAT TGACTTCGTC GAATATCGTT ACTTCGGTAT TGAAAAAACT
TACACTAAAG GTATTGCGTA TACTATTGCC TCGGTGGCCT TAATCTTCAT CAATGGTTTA
TTGCTTAACC ATTTCTTCCA CACAGCTATG ATGACTGGTG CTCAGTCCAA GTCTATTCTA
ACCAAGGCGT TATTAATGAA ATCTTTTGGC TTAAGCTCCA AGTCCAGGTA CATGTTCTCA
GTTGGGAGAA TTACTTCTTT AATGAGTACT GATTTGGCAA GAATTGATTT GGCCATTGGT
TTCCAACCAT TGGTTCTCTG TTTTCCCATT CCTATTATCG TTGCTGTAGT TTTGCTTTTG
GTTAACATCG GTGTTGCTTC CTTGTCTGGT ATTGGTTTGT TCATTGTTTC ATTAATCATC
TGTGTCATGT TGACAAAGAA GCTATTCGTT ACCAGAGAGA CCGGGGTTAA ATTCACGGAT
GAAAGAATTG GGTTGATGAG AGAAGTCTTG AACAACTTGA AGGTCATTAA GTTCTACGCT
TGGGAATTGG CTTACAAGAT GAGCATCACC AAGGTGAGAG AAAAGGAAAT GAAATATCTC
TTCACCATCA AAGTGTTGAG AAACTTCATC ACCGCTTATG CTGTCACTTT ACCAACCTTG
ACTTCCATGG TGTCATTTGT CACTATGTGG GCTACAGGCA CCAACAAGAC TCCTGGACAA
GTCTTTTCAT CTTTGTCGTT GTATTCCATT TTAGCTCAGG CTATTATGCT TTTGCCAATT
GCCTTGTCTA CTGGAGCCGA TGCCTTGATT GGTTTCACTC GTTGCAGAGA TTATTTGAGT
GCTGAAGAAT ACAACGAAGA GCTTGATGAA AAGTTGAACG CTTCTAATGA CAAATTCTAC
ATTGGTGAAG CTGAATTCAA GACTCCTCGT AGTTCTGCTG CTTCATCTAT GAATTCCAAG
AACTCAAACG AAACTCTCAT TGAAATTCGC CATGCAAATT TTATCTGGGA ATCCTTCCAC
GACGAATTGG ATGCTGAACT TTGGGATGTT GGTGTAAAGA AAGATAAGAA AGATAAGAAA
TCAAAGACTA AAAAAACAAT GGAACATATT AGTGTCACCA ACGAAAAGGA AGACCAATTC
AACTCTTCAG GATATTCAAA GACTACTGTT GTCGACTCAG TTTCGTCTTT AGGTTCTACT
CAAGCACAAT TTCCAGGTTT AATTGATGTC AACCTCACTA TTAAGAAGAA TGAGTTCATT
ATTGTCACTG GAGTTATCGG TTCTGGTAAG ACTTCTCTTT TAAATGCCAT GAGCGGCTTC
ATGAAGTTAA GCAATCCTTC TACTGGCTCC ATCAGGATTA AGGACGACTT ATTGTTATGT
TCTGCCCCCT GGATTCAAAA CGCTACTGTC CGTGAAAACA TCTTGTTTGG AAGACAATAC
GATCCTGTCA AGTATAACCA GGTTCTTTAT GCATGTGCTT TAGAAGACGA CTTGACTGTT
CTTCCAGCTG GGGACAGAAC TGAAATAGGT GAAAGAGGTA TTACTTTGTC AGGTGGACAA
AAAGCAAGAA TTAACTTGGC TAGAGCTTGT TACGCTGAAG CTGAGATCTT ATTGTTTGAT
GACGTCATTT CTGCTGTCGA TGCTAGAGTC GGTAGACACA TTGTAAATAA CTTGTTCAAG
GGTTTGTTGA AGAATAAGAC AATCGTCTTG GCCACCCATC AATTGGGTAT AATTGAATCT
GCTGACAGAA TTGTCTTCTT AAATGGTGAT GGTTCTGTTG ACTGTGGCAC AGTTTCCGAA
TTAATTAGCA GAAACCGCAA CTTCGAAAGA TTGATTGAAT TCACCAAAGA AAATGAAGAA
CCTGAATCAA ACAACAACAG CGACTACAAT TTGAACAATA CAGTGGCTAA CGGTGAAGCC
GATGCCTTGA ATAACTTGAG TTTGTCTAGA CAAAGGTCTA TTGTTCCAGA CCAAGCTGAT
CTTACTGGGA GAACTACTAC AGACGAAGAA AGTGCTACTA ATGCCATTTC TTGGGACGTT
TACAAAAAGT ACATCGAATT GGGGTCTGGA ATCTTCGGAC GTGCTTGTAT TCCTGTCTTT
TTTTTCTTGA TTGCATTGGC TACATTTTTC CAAGTTTTCA CTAACACTTG GTTGTCATTC
TGGGTCGAGA AGAAATTCAA GGGTAAGAGT GATAACTTCT ATGTTGCTCT CTACGTTGCA
TTTGCCATCT TGACAGTCAT TTTCACTGCT ATTGAGTTCA CCATGTTGGC TTACATGAAT
AATAAATCCG CTCAAGCCTT GAATTCCAAA GCTGTTCAAA ATATATTGCA TGCTCCAATG
AGTTTCATGG ATACTACACC TTTGGGTAGA ATTTTGAATA GATTTACTAA GGACACTGAC
TCTTTGGATA ACGAAATTGG TGAACAAATG AGATTGTTCA TTTTCCCTTT GGCTACTATC
ATTGGTATTG TCATTTTGTG TTGCTGCTAC TTGCCTTGGT TTTTGCTTGC CGTTCCATTC
TTGGTATTGG CTTTTATTTT CCTTGCTAAC TTCTATCAGG GGTCCTCAAG AGAAATCAAG
AGACTTGAAG CCACTCAAAG ATCCTTGGTG TACAACAATT TCAACGAAAC CTTAACTGGT
ATGGCTACTA TCAGATCCTT CAAGGCTGAA GATGACTTCA TCAGAAAGAA CGATTATTTC
CTCAATAAGA TGAACGAAGC TTACTATTTG TCGATAGCAA CTCAAAGATG GTTATGTCTT
CACTTAGATA TGATTACTAG TGCCTTTGCA TTAATTATCT GTTTGCTTTG TGTCACCGAA
CAATTTAATA TTAGTGCATC ATCCACTGGT TTGTTGTTGA ACTATGTTAT ACAAATTGTC
GGTTTGTTAG CTTTGAGTGT CAGATCCATG ACTCAAGTAG AAAACGAGAT GTACTCAGTT
GAAAGAATGC ATGAATACTC TTTCAACTTA CCACAGGAAG CTGAATACAT GAAGACAGAT
TTCAAGCCTG CACCAGAATG GCCACAATCA GGTTATGTAT CATTCAAGGA TGTTTCCTTG
AGATACAGAC CAAACCTACC ATTGGTCTTG AAGGGAATGG ATCTCAATTT CTATCCTGGT
GAAAAGGTTG GTATTTGTGG TAGAACAGGT GCCGGTAAGT CATCGATCAT GACTGCTTTG
TACAGATTGA CTGAATTGGA AACTGGATCT ATTACAATTG ATGGTGTTGA TATCTCTAAC
TTAGGACTTC ACGACTTGAG ATCCAGATTA TCTATCATTC CTCAAGATCC TGTCTTGTTC
CAGGGTACCA TCAGAAAGAA CTTGGACCCA TTCGGTGAAC ACTCTGATAA TGTCTTATGG
GATTCTCTTA GAAGATCTGG ATTGTTAGAT GAACAAACTA TTAAATTCTG CAGACGCACG
CAATATGATC GTGCCAATGG TGTTGGCTAT GATGACTTGA ACAAATTTCA CCTTGATCAA
GTCGTTGAAG ATGAAGGTTC AAACTTCTCC TTAGGTGAGA GACAGTTGAT CGCTTTGGCC
AGGTCTTTGG TTCGTAACTC CAAGATTTTG ATTTTGGACG AGGCCACCTC CTCCGTTGAT
TTTGAAACTG ATTCCAAGAT TCAAGACACT ATTTCAAATG AGTTCAAACA ATGTACAATT
TTGTGTATTG CCCACAGATT GAAAACAATT TTACACTACG ATAGAATTAT TGTCATGGAC
CAAGGAAACA TTGCTGAAAA AGGAACTCCT TGGGCTTTGT ACAACCAAAA CGGAATCTTT
AGACAAATGT GTGACAAAGC AAACATCACT GCGGAAGAAT TCTGA
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| Protein sequence | QLSNERRWFS WLFSKEVPTV PLPEERIEYA SKHANPLQTL LFWWLWPILV KGYKRTLQPN
DLWILPTEMT VEDMHKRWEE NMQKILEKAE KKHLKKNDDL SNFEWPLWAV PYALYLTFKL
QYTMSTILLA LSFCCQSLSP LITRRLIDFV EYRYFGIEKT YTKGIAYTIA SVALIFINGL
LLNHFFHTAM MTGAQSKSIL TKALLMKSFG LSSKSRYMFS VGRITSLMST DLARIDLAIG
FQPLVLCFPI PIIVAVVLLL VNIGVASLSG IGLFIVSLII CVMLTKKLFV TRETGVKFTD
ERIGLMREVL NNLKVIKFYA WELAYKMSIT KVREKEMKYL FTIKVLRNFI TAYAVTLPTL
TSMVSFVTMW ATGTNKTPGQ VFSSLSLYSI LAQAIMLLPI ALSTGADALI GFTRCRDYLS
AEEYNEELDE NSAASSMNSK NSNETLIEIR HANFIWESFH DELDAELWDV DQFNSSGYSK
TTVVDSVSSL GSTQAQFPGL IDVNLTIKKN EFIIVTGVIG SGKTSLLNAM SGFMKLSNPS
TGSIRIKDDL LLCSAPWIQN ATVRENILFG RQYDPVKYNQ VLYACALEDD LTVLPAGDRT
EIGERGITLS GGQKARINLA RACYAEAEIL LFDDVISAVD ARVGRHIVNN LFKGLLKNKT
IVLATHQLGI IESADRIVFL NGDGSVDCGT VSELISRNRN FERLIEFTKE NEEPESNNNS
DYNLNNTVAN GEADALNNLS LSRQRSIVPD QADLTGRTTT DEESATNAIS WDVYKKYIEL
GSGIFGRACI PVFFFLIALA TFFQVFTNTW LSFWVEKKFK GKSDNFYVAL YVAFAILTVI
FTAIEFTMLA YMNNKSAQAL NSKAVQNILH APMSFMDTTP LGRILNRFTK DTDSLDNEIG
EQMRLFIFPL ATIIGIVILC CCYLPWFLLA VPFLVLAFIF LANFYQGSSR EIKRLEATQR
SLVYNNFNET LTGMATIRSF KAEDDFIRKN DYFLNKMNEA YYLSIATQRW LCLHLDMITS
AFALIICLLC VTEQFNISAS STGLLLNYVI QIVGLLALSV RSMTQVENEM YSVERMHEYS
FNLPQEAEYM KTDFKPAPEW PQSGYVSFKD VSLRYRPNLP LVLKGMDLNF YPGEKVGICG
RTGAGKSSIM TALYRLTELE TGSITIDGVD ISNLGLHDLR SRLSIIPQDP VLFQGTIRKN
LDPFGEHSDN VLWDSLRRSG LLDEQTIKFC RRTQYDRANG VGYDDLNKFH LDQVVEDEGS
NFSLGERQLI ALARSLVRNS KILILDEATS SVDFETDSKI QDTISNEFKQ CTILCIAHRL
KTILHYDRII VMDQGNIAEK GTPWALYNQN GIFRQMCDKA NITAEEF
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