Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_59773 |
Symbol | |
ID | 4839726 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 1479825 |
End bp | 1481879 |
Gene Length | 2055 bp |
Protein Length | 651 aa |
Translation table | 12 |
GC content | 45% |
IMG OID | 640391041 |
Product | conserved hypothetical protein |
Protein accession | XP_001385286 |
Protein GI | 150865892 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGTTTG CGACGAGAAG CGCAGCAAAC ACACCTCTTT TGACTTCCAC AGACATTCCA CAACTTTCAG CCAGTCCCAT AATACGAGAA TCTATGACCA CGAAACTGGG TATAATGCTG CTACAGGATA CAGATGGAGG CATCTTGCAA TTGGGTAAAA AACGGCAGCT GTTCGTAGAA CCACAATTGG CTGAACCTGT GCCTGTTTAT ACGGGCTTAC CGTTGGAAGC TGGTCCTACA GCCAAAATAA AGAAAGATTC ACTATGGTCA TCTCGAAGTA GAAGAAGCGG AAAAAGCTCG TCCAGTACTT CCAGAGAAGG ATCCGCTGTC CCCCCAGAAG AACCAGATGT AGACACAGAT GTAGAAAAGT CGTACAACTC CAGTCTCCAA ACCAAGCTTT CTGAAGCCAT CACAACTGCG AGCGAAGTAA GAAAACCCTT GACGTTGAAG ATACGATCGT TGCGGAAACC CTCCAGTAGA ACTACGACAC CCAAACAACT CAAACGAACA GGGTCAGATT TGGCTTCTCC GCTTCGTTCT TCAAAACGGA TAAAGGTCAT ATCGCCGAAA AAACCAGCAT CGACAAATTT AGCACCTACA CCCATAATAC ATTCTCATGG TGAGGGCAAT GTTGACGACG ACCCTACGAA GGACAATGAC GACTTCTGTA GTGCCTGTGG AGGTCCAGGT GTGTTCATTT GTTGTGAGAC GTGTCCCAAG TCGTTCCACT TTACGTGCTG CGATCCTCCA TTAGAAGAGG CTCCAGAAGA TGACTGGTTC TGTAGAGAGT GTATAGCCAA GAAGAATCCA TCCTTGCTTC AGAAATGGAC CGATATCGGC ATTTTCGCCC AGTTGATGAA CCAGCTGGAG TCAAGAAACC CCAAGGTATT CCAACTTCCT AAGAATCTAC GTGACGGTAC GTATATAGGA GTTTATACAG CACCAAACGG AGACTATGCT GACGATACGA TGAAGCCGGA GTTGTCCTAT ACCAGAGCCA ACGGAGCCCA GATTCCAGGC TACAACAAGA ATATCGATTT AGAAATTGAC AGTCTCTTCG ACAAAGACGG AAATCCCTAC TTATGTCACA AGTGTGGACA ATCTGGCTTA AGGAACCGCA TCATCTCTCA CTGCGATTAC TGCCCATTAG TGTGGCATAT TGATTGCTTG GATGAACCGA TGTTTGGACC CAAAACGATT GGGACGAAGT GGAGATGTCC CAACCACGTA GAAGAACTCA TCCCCAGGGA CTTAATCAGG ACCAGAAGGC TGAAGGACAC TGTTGTAATA GAACCTTCAA TTCGGAACCA CTTTTTACGG TTGGCTTCGT TGAGCGATAT CGTCATCAAG TTCGATGATC AGCCCTATAT TAAACAAGAA AGGACGCCTT CCTTACAAGA GTACTTACAG TATCAACTAG AGAATTTCTC GAAAAAGGAC AGGAAGTATA TTGACGACAG AAACGGTGCG ATGGATATCG ACGACTTTGA CGAGGTCCAC AGCAACTACA AGTTGCCAGA CTATTTCGAG TCGACATCGA CGTCTTTCGG AGTTTCAGCA AAAGCTTCCA CAGGCTTGAA GCGAGTAATT AGCATCACAT CTGAAGATGA TGACAGTCAA GTGAGCTCAT TTGTATACCG AGTTCCAGAG AAACTGATAC TTCTCGACTT TTGCACCAAA GTTAAAGGCG ACCAGACACA GCCAAAGATA TCCAAAAAGA AAATACTCGA CAACATAACA GATTACGATA ACCTAAAGAG AGTAGAGACA AATATTGAAG ACAGAATAGT GGTAGAGAGC TTGAACGATA TCAAGATTCA TACTAACACA AGATCGCAAC CAAAGTTAAA TTTCGACGAG TTGGTGCAAG CGGCGTTGGC TGACGAGAGC AGCATAGAAA GCATCAAACT AGAAACACCT AGTACCGCCA ATTCTGACAG CGATATTGAC GGTGATGTTG GTTTAGATAA CAGCACCTTG GAAGAACTCT TAAAGATAAA AAAGTTGATG GAGCTCAAGG GTCAAGATGC TCTCATGAAG TTTCTTCAGT CATAA
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Protein sequence | MRFATRSAAN TPLLTSTDIP QLSASPIIRE SMTTKSDGGI LQLGKKRQSF VEPQLAEPVP VYTGLPLEAG PTAKIKKDSL WSSRSRRSGK SSSSTSREGS AVPPEEPDVD TDVEKSYNSS LQTKLSEAIT TASEVRKPLT LKIRSLRKPS SRTTTPKQLK RTGSDLASPL RSSKRIKVIS PKKPASTNLA PTPIIHSHGE GNVDDDPTKD NDDFCSACGG PGVFICCETC PKSFHFTCCD PPLEEAPEDD WFCRECIAKK NPSLLQKWTD IGIFAQLMNQ SESRNPKVFQ LPKNLRDGTY IGVYTAPNGD YADDTMKPEL SYTRANGAQI PGYNKNIDLE IDSLFDKDGN PYLCHKCGQS GLRNRIISHC DYCPLVWHID CLDEPMFGPK TIGTKWRCPN HVEELIPRDL IRTRRSKDTV VIEPSIRNHF LRLASLSDIV IKFDDQPYIK QERTPSLQEY LQYQLENFSK KDRKYIDDRN GAMDIDDFDE VHSNYKLPDY FESTSTSFGV SAKASTGLKR VISITSEDDD SQVSSFVYRV PEKSILLDFC TKISKKKILD NITDYDNLKR VETNIEDRIV VESLNDIKIH TNTRSQPKLN FDELVQAATA NSDSDIDGDV GLDNSTLEEL LKIKKLMELK GQDALMKFLQ S
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