Gene PICST_59773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_59773 
Symbol 
ID4839726 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp1479825 
End bp1481879 
Gene Length2055 bp 
Protein Length651 aa 
Translation table12 
GC content45% 
IMG OID640391041 
Productconserved hypothetical protein 
Protein accessionXP_001385286 
Protein GI150865892 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTTG CGACGAGAAG CGCAGCAAAC ACACCTCTTT TGACTTCCAC AGACATTCCA 
CAACTTTCAG CCAGTCCCAT AATACGAGAA TCTATGACCA CGAAACTGGG TATAATGCTG
CTACAGGATA CAGATGGAGG CATCTTGCAA TTGGGTAAAA AACGGCAGCT GTTCGTAGAA
CCACAATTGG CTGAACCTGT GCCTGTTTAT ACGGGCTTAC CGTTGGAAGC TGGTCCTACA
GCCAAAATAA AGAAAGATTC ACTATGGTCA TCTCGAAGTA GAAGAAGCGG AAAAAGCTCG
TCCAGTACTT CCAGAGAAGG ATCCGCTGTC CCCCCAGAAG AACCAGATGT AGACACAGAT
GTAGAAAAGT CGTACAACTC CAGTCTCCAA ACCAAGCTTT CTGAAGCCAT CACAACTGCG
AGCGAAGTAA GAAAACCCTT GACGTTGAAG ATACGATCGT TGCGGAAACC CTCCAGTAGA
ACTACGACAC CCAAACAACT CAAACGAACA GGGTCAGATT TGGCTTCTCC GCTTCGTTCT
TCAAAACGGA TAAAGGTCAT ATCGCCGAAA AAACCAGCAT CGACAAATTT AGCACCTACA
CCCATAATAC ATTCTCATGG TGAGGGCAAT GTTGACGACG ACCCTACGAA GGACAATGAC
GACTTCTGTA GTGCCTGTGG AGGTCCAGGT GTGTTCATTT GTTGTGAGAC GTGTCCCAAG
TCGTTCCACT TTACGTGCTG CGATCCTCCA TTAGAAGAGG CTCCAGAAGA TGACTGGTTC
TGTAGAGAGT GTATAGCCAA GAAGAATCCA TCCTTGCTTC AGAAATGGAC CGATATCGGC
ATTTTCGCCC AGTTGATGAA CCAGCTGGAG TCAAGAAACC CCAAGGTATT CCAACTTCCT
AAGAATCTAC GTGACGGTAC GTATATAGGA GTTTATACAG CACCAAACGG AGACTATGCT
GACGATACGA TGAAGCCGGA GTTGTCCTAT ACCAGAGCCA ACGGAGCCCA GATTCCAGGC
TACAACAAGA ATATCGATTT AGAAATTGAC AGTCTCTTCG ACAAAGACGG AAATCCCTAC
TTATGTCACA AGTGTGGACA ATCTGGCTTA AGGAACCGCA TCATCTCTCA CTGCGATTAC
TGCCCATTAG TGTGGCATAT TGATTGCTTG GATGAACCGA TGTTTGGACC CAAAACGATT
GGGACGAAGT GGAGATGTCC CAACCACGTA GAAGAACTCA TCCCCAGGGA CTTAATCAGG
ACCAGAAGGC TGAAGGACAC TGTTGTAATA GAACCTTCAA TTCGGAACCA CTTTTTACGG
TTGGCTTCGT TGAGCGATAT CGTCATCAAG TTCGATGATC AGCCCTATAT TAAACAAGAA
AGGACGCCTT CCTTACAAGA GTACTTACAG TATCAACTAG AGAATTTCTC GAAAAAGGAC
AGGAAGTATA TTGACGACAG AAACGGTGCG ATGGATATCG ACGACTTTGA CGAGGTCCAC
AGCAACTACA AGTTGCCAGA CTATTTCGAG TCGACATCGA CGTCTTTCGG AGTTTCAGCA
AAAGCTTCCA CAGGCTTGAA GCGAGTAATT AGCATCACAT CTGAAGATGA TGACAGTCAA
GTGAGCTCAT TTGTATACCG AGTTCCAGAG AAACTGATAC TTCTCGACTT TTGCACCAAA
GTTAAAGGCG ACCAGACACA GCCAAAGATA TCCAAAAAGA AAATACTCGA CAACATAACA
GATTACGATA ACCTAAAGAG AGTAGAGACA AATATTGAAG ACAGAATAGT GGTAGAGAGC
TTGAACGATA TCAAGATTCA TACTAACACA AGATCGCAAC CAAAGTTAAA TTTCGACGAG
TTGGTGCAAG CGGCGTTGGC TGACGAGAGC AGCATAGAAA GCATCAAACT AGAAACACCT
AGTACCGCCA ATTCTGACAG CGATATTGAC GGTGATGTTG GTTTAGATAA CAGCACCTTG
GAAGAACTCT TAAAGATAAA AAAGTTGATG GAGCTCAAGG GTCAAGATGC TCTCATGAAG
TTTCTTCAGT CATAA
 
Protein sequence
MRFATRSAAN TPLLTSTDIP QLSASPIIRE SMTTKSDGGI LQLGKKRQSF VEPQLAEPVP 
VYTGLPLEAG PTAKIKKDSL WSSRSRRSGK SSSSTSREGS AVPPEEPDVD TDVEKSYNSS
LQTKLSEAIT TASEVRKPLT LKIRSLRKPS SRTTTPKQLK RTGSDLASPL RSSKRIKVIS
PKKPASTNLA PTPIIHSHGE GNVDDDPTKD NDDFCSACGG PGVFICCETC PKSFHFTCCD
PPLEEAPEDD WFCRECIAKK NPSLLQKWTD IGIFAQLMNQ SESRNPKVFQ LPKNLRDGTY
IGVYTAPNGD YADDTMKPEL SYTRANGAQI PGYNKNIDLE IDSLFDKDGN PYLCHKCGQS
GLRNRIISHC DYCPLVWHID CLDEPMFGPK TIGTKWRCPN HVEELIPRDL IRTRRSKDTV
VIEPSIRNHF LRLASLSDIV IKFDDQPYIK QERTPSLQEY LQYQLENFSK KDRKYIDDRN
GAMDIDDFDE VHSNYKLPDY FESTSTSFGV SAKASTGLKR VISITSEDDD SQVSSFVYRV
PEKSILLDFC TKISKKKILD NITDYDNLKR VETNIEDRIV VESLNDIKIH TNTRSQPKLN
FDELVQAATA NSDSDIDGDV GLDNSTLEEL LKIKKLMELK GQDALMKFLQ S