| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_47531 |
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| Symbol | COX10 |
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| ID | 4839720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 629876 |
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| End bp | 631234 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640391035 |
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| Product | Heme A farnesyltransferase |
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| Protein accession | XP_001384788 |
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| Protein GI | 150865531 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0109] Polyprenyltransferase (cytochrome oxidase assembly factor) |
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| TIGRFAM ID | [TIGR01473] protoheme IX farnesyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.695562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.861944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCACTC GAATAATAGT GTTGCCTAGA TTGAATAAGG TCAACAATTT TAATTTCTTC
TTCAAGAATA CTAAGAAGAA GTTACACGTA AATCAGAACT TCATAGCCAA TCCATTTTTG
GCCCTTTATG GTCGGAATTC CACAGTTTCA ATAAGAGGCA GAGGTCTAAA TCCCTCAGTA
TCAGCCAATG AGACTTCTGA ATCAAATAAA GAAACTTCAA AAAATTCGAT ACTCGAAGAT
GTTGCTACAA AAGTATTGAA TTGCCAGGAA CCAGAAGCTA AGCTGTCCCA GAAAACCAAT
TCCAGTCATA TTCCATTCAA GGTTGTTCCT AGGGAGCCTT CAAAGTCTTC TGAAGCCAAA
TTTGCGACCC TTAGCACTAT CCCAAATACA TCAACGGACC TCCGTAGCAG AATCAATCCT
TATATTAAAC TCACGAAGCC CAATTTGACT GTCCTTGTTA CTCTAAGTTC AATATGTTCT
TATGCGATTT CACCCTATTC AGTATCTTTA GGAGAGTTGG CATTTTTGAC CATAGGGACA
GCTTTGTGTT CCGGTGCTGC GAATGCTATT AATATGGGTA GAGAACCTGA GTTTGATAAG
AAGATGCCCA GAACAGTTGG GAGACCAGTC GTCCGTGGAT TGGTTTCTCC AACGCAAGCC
TATACTTTTG CTGCTGCAAC AGGTACTATT GGATGCTCAA TGCTTTGGAT AGGAGTTAAT
CCCACTGTTG CAATTCTTGG ATTCACAAAT TTGGTATTAT ATGCTTGGAT TTATACATCA
CTTAAGCGAA GGTCTATTAT CAACACTTGG GTTGGTGCTA TTGTCGGTGC CATTCCTCCC
TTGATGGGTT GGGCGGCCTC ATCGCCTCTT TCACATCCTG GTGCTTGGTG TCTTGCTGGT
TTGTTGTATG CTTGGCAATT TCCACATTTC AATGCATTAT CTCATAACAT TGCTGAGCAA
TATAAGCAAG CTGGGTATGT CATGACTGCT GCCGAAAACC CTAAATTGAA TGCCCGAGTT
GCTTTGCGCT ACTCATTTTT GATGTTTCCA TTGTGTTTCG GATTGACTTA TTATGGTGTT
ACTGACTGGG TATTTCCTAT TGATTCGGCT ATTGCAAATG GTTGGTTAGC ATACCTAGCC
TTCCAATTCT GGAGACAACA GCAAAAAAAC TACTCGGGTT CAAACCCAAC AGCTGAAGGT
TTGGCATTGG CAGGCACTCA TGCAAAGAAA TTGTTCTGGT GTTCGGTTTG GCATTTACCT
GCTGTATTGA TACTAGCCAT GATTCATAAA AAAGGACAGT GGGACAGGTG GTTTAGATAC
TTGGGTCTAA ATAGTGATGA TGCCGTGTTG AGCTCATGA
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| Protein sequence | MSTRIIVLPR LNKVNNFNFF FKNTKKKLHV NQNFIANPFL ALYGRNSTVS IRGRGLNPSV
SANETSESNK ETSKNSILED VATKVLNCQE PEAKSSQKTN SSHIPFKVVP REPSKSSEAK
FATLSTIPNT STDLRSRINP YIKLTKPNLT VLVTLSSICS YAISPYSVSL GELAFLTIGT
ALCSGAANAI NMGREPEFDK KMPRTVGRPV VRGLVSPTQA YTFAAATGTI GCSMLWIGVN
PTVAILGFTN LVLYAWIYTS LKRRSIINTW VGAIVGAIPP LMGWAASSPL SHPGAWCLAG
LLYAWQFPHF NALSHNIAEQ YKQAGYVMTA AENPKLNARV ALRYSFLMFP LCFGLTYYGV
TDWVFPIDSA IANGWLAYLA FQFWRQQQKN YSGSNPTAEG LALAGTHAKK LFWCSVWHLP
AVLILAMIHK KGQWDRWFRY LGLNSDDAVL SS
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