Gene PICST_47473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47473 
SymbolFUR1 
ID4839411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp705797 
End bp706453 
Gene Length657 bp 
Protein Length218 aa 
Translation table12 
GC content44% 
IMG OID640390726 
Producturacil phosphoribosyltransferase 
Protein accessionXP_001385142 
Protein GI126137237 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0035] Uracil phosphoribosyltransferase 
TIGRFAM ID[TIGR01091] uracil phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.355381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACTT CTCAAGAAAT CAACAAGAAC GTCATTCTTC TTCCTCAGAC AAACCAATTG 
ATTGGGTTAT ACTCTATAAT CCGTGACCAG AAGACCAAGA GAGGAGATTT CGTCTTTTAT
TCCGACAGAA TCATCCGTCT CTTAGTGGAA GAGGGTTTGA ATCAATTGCC AGTGGAAGAA
GCTACCATTG AGTGTCACGG TGGTAACCAG TACAAGGGTG CAAAGTTCTT GGGTAAGATC
TGTGGTGTAT CCATTGTCAG AGCTGGCGAG TCTATGGAAA TGGGATTGAG AGACTGTTGT
AGATCTGTGA GAATCGGCAA GATTTTGATC CAAAGAGATG AAGAAACCGC TTTGCCCAAG
TTATTCTACG AAAAATTACC CGAAGACATC AGCGAACGTT ACGTCTTCTT ATTGGACCCT
ATGTTGGCTA CTGGTGGTAG TGCCATGATG GCTGTGGAAG TGTTATTGTC CAGAGGGGTC
AAGATGGATA GAATCTTTTT CTTGAACTTG TTGGCAGCCC CAGAAGGCAT CAAGGCTTTC
CAAGATAAGT ACCCTGATGT CAAGATCATC ACGGGTGGTA TCGACGAAAA GTTGGACGAG
AATAAGTACA TAGTTCCGGG CTTGGGTGAC TTTGGAGACA GATACTATTG TATCTAG
 
Protein sequence
MATSQEINKN VILLPQTNQL IGLYSIIRDQ KTKRGDFVFY SDRIIRLLVE EGLNQLPVEE 
ATIECHGGNQ YKGAKFLGKI CGVSIVRAGE SMEMGLRDCC RSVRIGKILI QRDEETALPK
LFYEKLPEDI SERYVFLLDP MLATGGSAMM AVEVLLSRGV KMDRIFFLNL LAAPEGIKAF
QDKYPDVKII TGGIDEKLDE NKYIVPGLGD FGDRYYCI