Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PICST_47366 |
Symbol | |
ID | 4839148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Scheffersomyces stipitis CBS 6054 |
Kingdom | Eukaryota |
Replicon accession | NC_009045 |
Strand | - |
Start bp | 146204 |
End bp | 146476 |
Gene Length | 273 bp |
Protein Length | 90 aa |
Translation table | 12 |
GC content | 43% |
IMG OID | 640390463 |
Product | predicted protein |
Protein accession | XP_001385048 |
Protein GI | 150865716 |
COG category | [K] Transcription |
COG ID | [COG1958] Small nuclear ribonucleoprotein (snRNP) homolog |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCGTCAC ACAAAGCTAC CGGCAAAAAG TCGATGCTTC CTCCCATTAA CTTGATTTTC AAGTACTTGC AACAACAATC ACCAGTTACC ATCTGGCTCT ACGAACAAAC CCAGCTGAGA ATACAGGGCA AGATCCGTGG GTTTGATGAG TTCATGAATA TTGTAATAGA CGACGCCGTA GAGATTTCCA CTAAGGACGG GTCCAAGGAG GAATTAGGCA GAATACTATT GAAGGGTGAC AACATTACTT TGATTTCCAG TTTGGATGTC TAG
|
Protein sequence | MSSHKATGKK SMLPPINLIF KYLQQQSPVT IWLYEQTQSR IQGKIRGFDE FMNIVIDDAV EISTKDGSKE ELGRILLKGD NITLISSLDV
|
| |