Gene PICST_47366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPICST_47366 
Symbol 
ID4839148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameScheffersomyces stipitis CBS 6054 
KingdomEukaryota 
Replicon accessionNC_009045 
Strand
Start bp146204 
End bp146476 
Gene Length273 bp 
Protein Length90 aa 
Translation table12 
GC content43% 
IMG OID640390463 
Productpredicted protein 
Protein accessionXP_001385048 
Protein GI150865716 
COG category[K] Transcription 
COG ID[COG1958] Small nuclear ribonucleoprotein (snRNP) homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCAC ACAAAGCTAC CGGCAAAAAG TCGATGCTTC CTCCCATTAA CTTGATTTTC 
AAGTACTTGC AACAACAATC ACCAGTTACC ATCTGGCTCT ACGAACAAAC CCAGCTGAGA
ATACAGGGCA AGATCCGTGG GTTTGATGAG TTCATGAATA TTGTAATAGA CGACGCCGTA
GAGATTTCCA CTAAGGACGG GTCCAAGGAG GAATTAGGCA GAATACTATT GAAGGGTGAC
AACATTACTT TGATTTCCAG TTTGGATGTC TAG
 
Protein sequence
MSSHKATGKK SMLPPINLIF KYLQQQSPVT IWLYEQTQSR IQGKIRGFDE FMNIVIDDAV 
EISTKDGSKE ELGRILLKGD NITLISSLDV