| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PICST_46942 |
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| Symbol | |
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| ID | 4839575 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Scheffersomyces stipitis CBS 6054 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009045 |
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| Strand | + |
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| Start bp | 82734 |
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| End bp | 85145 |
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| Gene Length | 2412 bp |
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| Protein Length | 788 aa |
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| Translation table | 12 |
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| GC content | 41% |
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| IMG OID | 640390890 |
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| Product | predicted protein |
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| Protein accession | XP_001384670 |
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| Protein GI | 150865448 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5540] RING-finger-containing ubiquitin ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTAG ATCGACAGAC ATTGCTATAT TTCATCATTA TGCTCATATT TATTACACTT
CCCAGTGGCA ATGACCAGCC GCATTCCACA CGGGAAAAGG AGACCTTGAT CACATATCAG
AAACACCTTC GACTGGAGCA AGAAGAATTA GCTAATAGCA CCTACACTTC GGGTTACGGG
AATGTCACGG GATTTCATTT ATCCTACCAG GACCTTGTAG ATGGTCACAA TGAGACAGAA
TGGCCCTTAC ATCGATTCAA TGATAAACAT CATTGGCGAG AAGACGAAAA GTTCTCGCTC
TTACCGAATT CCGTGAGCGA CGTAATTAAG CTGTTTTGGG CTCAAGAACC AGTGCTAAGC
GAGCGTGACG ACAAGGCCTA TTTGCTTAAT ATTTCAGGAC AGGCATTTGG AGAGTTCAAG
ATACATTCCG TTTCCGACTT GAAAAGATAC AACTTCACTC TTCCTGATTA TCTCCAGAAG
TACTATGATT CGTACGACCC TAATCAGAAT GCTCCCGAGG ATGGAGAGCA AGAATCTCCC
CTTCCTCCAG ACCCGATGAT ACTGAAGCCA ATTCAGAAAA CAGGGAATAT GACCAAATCA
TCCGGAAAAA TTTCCTTGCA AATAAGTGCA TACGACTACA ATTATCGAAA CGCGGAGCTT
TCGAAGTTTA TCTTCAACGA AACTACAGAC AGAATAAACG ACACAGTAGT GGCGAGAGTG
GCGATGAGCT TGAAAGACTA CGACGAGATA GAATCTCACG ACTTAGAGAC TAGAGGAGTG
TATTTCCAAG AAACTGGGGC ATTGGTAACG ATAACGAGAT CAGCAAAGTT CTTGGGTACT
CATGGATTGA GCCACATGAC TTTGAATGAG AAAAATTTCA ATCGCGCAAA GGTACTATTG
GGCCAGTACT TGAACTTTAC TGACAACGAA CGAGACTTGA ACCTTGACAA CATGAATAAC
AACATCTTAA GAAGTAGAGA CAGCTGTGAG ATGATTTCGT ACTTCCAATT TGAAAAGACG
GATTACACTA AACAAGAGCT TCAAAACATA GACGAAGAGT TGATTGCTCC AAGCGGTAGT
CCCATCCCTA AAGACTTACC CGGTCTCAAA ATCAAGGAAT TCTTGTTGTA TTCGCCTGAC
TGTGGATTGC TCTTTCAATC GAAGCCAGGG ATAGAATTCA TAGGTTTAAA GTCTGAAATT
TACAACATTA GATTTCGACA CGTATTAATT GGGCTCATGC TTTTGATAAT TATCCAATTG
ATATTGTTCT TGAGACAGAT TAAGGAAACA AGAACTCCTG GCCAATTGTC CACCATAGCA
ACAAACACAT TATATATGAT CGGTTTTCAA GATGCCTTGG TTGTGTTTCT GTTGATTTTG
TTTTCATCGT TCTCGGAGGA CTTATACCTT ATTCTTGCCT GTGTTGCTGT TTTGGCATTT
GTAATGAGTG GGATATTCGA AATGAGATTT ATAGTGAATG TAATGAGTAC TCAGGTCAAT
GAGAGAGGAA CCACATGGTG GCAAATATTG AGGGGAGGGA CGGCTGAAAC TACAATAACT
GATCCTACTC CTGAACCTCA ATCTACTGAA AACACAAACG AACCTTTACT TCCTACAACG
AATCCTCCAG CAAATGCCCC TACCACAGCA GCAACAACCA CTAATACAAC TCCAGGAATG
GAAGAGTCCA ATATATGGAA TAAAATATTT GGGCTTGGTG GATTTTTAAC GATCGCATTC
ACATTTTTGA TCTGGAATTC CACATTATGG AGAGCAAGCT ACAGAAAGAT ATTTGAATAT
GTTGGGTTGA TTCTCGTGAA CTCATTCTGG ATTCCTCAGT TCTTGCGGAA TACACTTAAA
AATCGTAGAA AATCATTTTC GTGGGAGTTT GTCTTAGGCA CCAGTCTTGT TAGGTTGGTA
CCTGTGATCT ATATATGTCT TGAGGACAAT ATTGGCAGAC ACCGTTACGA CCCAGTTTTG
GTTTCAGTGC TAACCAGTTG GCTTTCATTC CAAATTTTAT TGTTGGTGCT ACAGCTGTAC
ATGGGACCTC GGTTCTGGGT CAATGAAAAG TGGCTTCCAA AGGCTTACGA TTATCAGAAG
ATTTTGCATA TTAAAGATCT CGAACATAAT TTTTCAAGTG AGCTATTAGC AAATATTAAA
CCTAATGAAG GTGGAAACGA AGAGCAGGAC AAGGGAATAA TCGAGTGCAA GTGCACTTGC
CCAATTTGTA TGACCGACAT CAGCTTGCCG ATTTTGACTA AAGATGGCGA CGAAAGCAGA
CGTAGGAAAA TCAACAACAA GTTGTATATG ATTACGCCTT GCTACCATAT TTTTCATTCC
GAGTGTCTTG AGAGCTGGAT GAAATACAAG TTGCAGTGTC CCGTTTGTAG AGAGAGTCTT
CCACCAATAT GA
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| Protein sequence | MEVDRQTLLY FIIMLIFITL PSGNDQPHST REKETLITYQ KHLRSEQEEL ANSTYTSGYG
NVTGFHLSYQ DLVDGHNETE WPLHRFNDKH HWREDEKFSL LPNSVSDVIK SFWAQEPVLS
ERDDKAYLLN ISGQAFGEFK IHSVSDLKRY NFTLPDYLQK YYDSYDPNQN APEDGEQESP
LPPDPMISKP IQKTGNMTKS SGKISLQISA YDYNYRNAEL SKFIFNETTD RINDTVVARV
AMSLKDYDEI ESHDLETRGV YFQETGALVT ITRSAKFLGT HGLSHMTLNE KNFNRAKVLL
GQYLNFTDNE RDLNLDNMNN NILRSRDSCE MISYFQFEKT DYTKQELQNI DEELIAPSGS
PIPKDLPGLK IKEFLLYSPD CGLLFQSKPG IEFIGLKSEI YNIRFRHVLI GLMLLIIIQL
ILFLRQIKET RTPGQLSTIA TNTLYMIGFQ DALVVFSLIL FSSFSEDLYL ILACVAVLAF
VMSGIFEMRF IVNVMSTQVN ERGTTWWQIL RGGTAETTIT DPTPEPQSTE NTNEPLLPTT
NPPANAPTTA ATTTNTTPGM EESNIWNKIF GLGGFLTIAF TFLIWNSTLW RASYRKIFEY
VGLILVNSFW IPQFLRNTLK NRRKSFSWEF VLGTSLVRLV PVIYICLEDN IGRHRYDPVL
VSVLTSWLSF QILLLVLQSY MGPRFWVNEK WLPKAYDYQK ILHIKDLEHN FSKQDKGIIE
CKCTCPICMT DISLPILTKD GDESRRRKIN NKLYMITPCY HIFHSECLES WMKYKLQCPV
CRESLPPI
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